RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 OR4N5Q8IXE1 308 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CMTM1Q8IZ96 169 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 METTL4Q8N3J2 472 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 OR51G2Q8NGK0 314 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 OR56A3Q8NH54 315 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 NANOS1Q8WY41 292 aaKnown RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 RNF6Q9Y252 685 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 NME7Q9Y5B8 376 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TP53I11O14683 189 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 OR2T1O43869 369 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF821O75541 412 aaPredicted RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 PRPS2P11908 318 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF33AQ06730 810 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ARL13AQ5H913 290 aaPredicted RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 IL34Q6ZMJ4 242 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SLC26A9Q7LBE3 791 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 PGAM4Q8N0Y7 254 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 REEP6Q96HR9 211 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 MAELQ96JY0 434 aaKnown RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TRMOQ9BU70 441 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM248Q9NWD8 314 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TECPR2O15040 1411 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF860A6NHJ4 632 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CBX7O95931 251 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 FBLP22087 321 aaKnown RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CHATP28329 748 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 NMBRP28336 390 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 PTH2RP49190 550 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 AIF1P55008 147 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 RAB8AP61006 207 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 EOGTQ5NDL2 527 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 OR14L1PQ8NHC6 308 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 INTS12Q96CB8 462 aaKnown RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ITPAQ9BY32 194 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 RAB9BQ9NP90 201 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM98Q9Y2Y6 226 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SC5DO75845 299 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ERVK-25P63136 954 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 RNASE10Q5GAN6 216 aaKnown RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 C3P1Q6ZMU1 363 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TMEM185AQ8NFB2 350 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ITM2CQ9NQX7 267 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 FAM86C1Q9NVL1 165 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CPQQ9Y646 472 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 OR6C75A6NL08 312 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 HSPB6O14558 160 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 PNMTP11086 282 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 VEGFCP49767 419 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 RPL7AP62424 266 aaKnown RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ARL6IP1Q15041 203 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 FAM26DQ5JW98 314 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CCDC116Q8IYX3 515 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 KIAA1958Q8N8K9 716 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ZNF230Q9UIE0 474 aaPredicted RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TMX2Q9Y320 296 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 LOC100130705A0A1B0GUX0 176 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 WNT9AO14904 365 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 FMO6PO60774 539 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SOX30O94993 753 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 POLR2CP19387 275 aaPredicted RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 F8A1P23610 371 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 DNASE1P24855 282 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CRHR1P34998 444 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 GSK3AP49840 483 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 CHRNEQ04844 493 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 HYAL4Q2M3T9 481 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SLC36A4Q6YBV0 504 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TOP6BLQ8N6T0 577 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SUMF2Q8NBJ7 301 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 SECISBP2Q96T21 854 aaKnown RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 DEFB126Q9BYW3 111 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
HIPK3-202ENST00000379016 ARHGEF40Q8TER5 1519 aa12.78□□□□□ -0.36
HIPK3-202ENST00000379016 TRBC2A0A5B9 178 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 SPDEFO95238 335 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 H6PDO95479 791 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 EOMESO95936 686 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 CRYBB1P53674 252 aaPredicted RBP12.77□□□□□ -0.36
HIPK3-202ENST00000379016 FAM185AQ8N0U4 392 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 C9orf43Q8TAL5 461 aaPredicted RBP12.77□□□□□ -0.36
HIPK3-202ENST00000379016 BBS10Q8TAM1 723 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 DOK4Q8TEW6 326 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 PATZ1Q9HBE1 687 aaKnown RBP12.77□□□□□ -0.36
HIPK3-202ENST00000379016 HMGXB3Q12766 1538 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 A0A1W2PPW3 197 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 TTC24A2A3L6 582 aaPredicted RBP12.77□□□□□ -0.36
HIPK3-202ENST00000379016 PEX2P28328 305 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 BDKRB1P46663 353 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 PREPP48147 710 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 C9orf57Q5W0N0 161 aa12.77□□□□□ -0.36
HIPK3-202ENST00000379016 PPP1R35Q8TAP8 253 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms