RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ANKDD1BA6NHY2 528 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 SAGE2PA6NJ88 616 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 ENTPD6O75354 484 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 SOX14O95416 240 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 TIMP1P01033 207 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 ADH5P11766 374 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 ADRB3P13945 408 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 EPCAMP16422 314 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 MAPK12P53778 367 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 PCBP4P57723 403 aaKnown RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 HTRA4P83105 476 aaPredicted RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 PNCKQ6P2M8 343 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 COMTD1Q86VU5 262 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 TAGAPQ8N103 731 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 CLIP4Q8N3C7 705 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 C9orf43Q8TAL5 461 aaPredicted RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 RAD51AP1Q96B01 352 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 ZNF514Q96K75 400 aaPredicted RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 MS4A8Q9BY19 250 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 RHBGQ9H310 441 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 SERHL2Q9H4I8 314 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 TAC3Q9UHF0 121 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 PRAMEF27A3QJZ7 478 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 HMGN4O00479 90 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 LZTS3O60299 673 aaPredicted RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 KDM1AO60341 852 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 GPX5O75715 221 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ERGP11308 486 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 MAGP20916 626 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ELAVL4P26378 380 aaKnown RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 PSMB5P28074 263 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 SLC6A11P48066 632 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ALDH9A1P49189 494 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 MANFP55145 182 aaKnown RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 ST8SIA6P61647 398 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ZNF45Q02386 682 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 PDZD3Q86UT5 571 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 SLC30A8Q8IWU4 369 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ETFBKMTQ8IXQ9 262 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 CACTIN-AS1Q8N1I8 211 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 POC5Q8NA72 575 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 FAM46DQ8NEK8 389 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 OR5P2Q8WZ92 322 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 SLC6A18Q96N87 628 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 OPALINQ96PE5 141 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 SDHCQ99643 169 aaPredicted RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 MENTQ9BUN1 341 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 HHATLQ9HCP6 504 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 TM7SF3Q9NS93 570 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 CLN6Q9NWW5 311 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 NDOR1Q9UHB4 597 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 CLEC2DQ9UHP7 191 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 SLC27A6Q9Y2P4 619 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 LSM2Q9Y333 95 aaKnown RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 SNRNP200O75643 2136 aaKnown RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 FEZF1A0PJY2 475 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 TMPRSS11DO60235 418 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 MPZL2O60487 215 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ADAP00813 363 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 OSMP13725 252 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 FRKP42685 505 aaPredicted RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 HSPB3Q12988 150 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ILKQ13418 452 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 LRRC26Q2I0M4 334 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 HNRNPA1L2Q32P51 320 aaKnown RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 TOR1AIP1Q5JTV8 583 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 C6orf120Q7Z4R8 191 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 HEATR4Q86WZ0 1026 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 KRT78Q8N1N4 520 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 AMER3Q8N944 861 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 TMIEQ8NEW7 156 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 WDR36Q8NI36 951 aaKnown RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 TFGQ92734 400 aaPredicted RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 DHRS1Q96LJ7 313 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 FUZQ9BT04 418 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 ENOPH1Q9UHY7 261 aa10.38□□□□□ -0.75
BEST1-201ENST00000378043 KIAA0100Q14667 2235 aaKnown RBP10.38□□□□□ -0.75
BEST1-201ENST00000378043 CCRL2O00421 344 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 CTDSP2O14595 271 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 TBX19O60806 448 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 EFCAB14O75071 495 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 SEMA3DO95025 777 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 TP53P04637 393 aaPredicted RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 RB1P06400 928 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 PIPP12273 146 aaPredicted RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 KELP23276 732 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 SERPINB1P30740 379 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 ETV6P41212 452 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 TMED10P49755 219 aaKnown RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 CARTPTQ16568 116 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 GAB4Q2WGN9 574 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 BCDIN3DQ7Z5W3 292 aaKnown RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 C17orf64Q86WR6 236 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 WFIKKN2Q8TEU8 576 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 ZFYVE19Q96K21 471 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 UCK2Q9BZX2 261 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 TEX10Q9NXF1 929 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms