RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 IGFN1Q86VF2 1251 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 KRT73Q86Y46 540 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 ACOT4Q8N9L9 421 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 OR2T29Q8NH02 315 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 BBS10Q8TAM1 723 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 OR51I1Q9H343 314 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 TRPS1Q9UHF7 1281 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 RALGAPA2Q2PPJ7 1873 aa7.71□□□□□ -1.18
CKAP2-203ENST00000378037 KLHL33A6NCF5 533 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 H7C0S8 307 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PLPP1O14494 284 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ACOT8O14734 319 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ERN1O75460 977 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ADH1BP00325 375 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 HNRNPA2B1P22626 353 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 LSM11P83369 360 aaKnown RBP eCLIP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ITGADQ13349 1161 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 DAG1Q14118 895 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SNAPC1Q16533 368 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 EXOC3L2Q2M3D2 409 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PDCD4Q53EL6 469 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 TECPR1Q7Z6L1 1165 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CBARPQ8N350 705 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 OR2L2Q8NH16 312 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SLC37A2Q8TED4 501 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SLC25A36Q96CQ1 311 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ZBED6CLQ96FA7 236 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PYURFQ96I23 114 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 MAP3K3Q99759 626 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 MAPKAP1Q9BPZ7 522 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 TMEM185BQ9H7F4 350 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 RPS6KA6Q9UK32 745 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SAMD4AQ9UPU9 718 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PCDHB3Q9Y5E6 796 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 FAM183AA6NL82 134 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 AREL1O15033 823 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PCDHGA12O60330 932 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 DNAJB6O75190 326 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 TNFP01375 233 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 HLA-DQA2P01906 255 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CBSLP0DN79 551 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 MATN1P21941 496 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CBSP35520 551 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 RPL5P46777 297 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 INHBCP55103 352 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CLDN6P56747 220 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 RPE65Q16518 533 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CNPY1Q3B7I2 92 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SLC36A3Q495N2 470 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ANXA8L1Q5VT79 327 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 GALNT12Q8IXK2 581 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SDR16C5Q8N3Y7 309 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CYB561A3Q8NBI2 242 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SLCO4A1Q96BD0 722 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PTCHD1Q96NR3 888 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ZBTB20Q9HC78 741 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PNPLA3Q9NST1 481 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 KLHL28Q9NXS3 571 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 WSB2Q9NYS7 404 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 EBF1Q9UH73 591 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 RIMS3Q9UJD0 308 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 A0A1B0GVT2 93 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SCAMP2O15127 329 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CAPN5O15484 640 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 TLX2O43763 284 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 REM1O75628 298 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 GABRA3P34903 492 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 BCL6P41182 706 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 STT3AP46977 705 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 GFERP55789 205 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 MYBPC1Q00872 1141 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 TGM3Q08188 693 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 DUSP7Q16829 419 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 DEPDC1Q5TB30 811 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PRPF38BQ5VTL8 546 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 KIAA1614Q5VZ46 1190 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 HLA-DQA1Q5Y7H0 255 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 FIGLAQ6QHK4 219 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 UBE2Q1Q7Z7E8 422 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PDZD3Q86UT5 571 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CYP4Z1Q86W10 505 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SLC5A8Q8N695 610 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 HORMAD2Q8N7B1 307 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ANKRD53Q8N9V6 530 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 WDR36Q8NI36 951 aaKnown RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 SMAP2Q8WU79 429 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ITFG2Q969R8 447 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 ECHDC3Q96DC8 303 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 HSPBAP1Q96EW2 488 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CXorf36Q9H7Y0 433 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 CCM2LQ9NUG4 571 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 BLOC1S6Q9UL45 172 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 COLQQ9Y215 455 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-203ENST00000378037 PIEZO1Q92508 2521 aa7.7□□□□□ -1.18
CKAP2-203ENST00000378037 A0A096LPI6 279 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 PCDH17O14917 1159 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 H6PDO95479 791 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 KRT75O95678 551 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 GYPBP06028 91 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms