RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZUFSPQ96AP4 578 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 TBC1D20Q96BZ9 403 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ROPN1LQ96C74 230 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 CDC6Q99741 560 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 GSTO2Q9H4Y5 243 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 KIR3DX1Q9H7L2 352 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 LIN28AQ9H9Z2 209 aaKnown RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 DMRT3Q9NQL9 472 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 EURLQ9NYK6 297 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 UBAP1Q9NZ09 502 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 CROCCQ5TZA2 2017 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 TLCD2A6NGC4 264 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 LMO7DNF2Z398 122 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 BLOC1S5-TXNDC5H3BN57 136 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 RRP8O43159 456 aaKnown RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF749O43361 778 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 SRPX2O60687 465 aaPredicted RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 P04436 131 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ST6GAL1P15907 406 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 GSK3BP49841 420 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF41P51814 821 aaPredicted RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 SLC18A1P54219 525 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 SLC30A6Q6NXT4 461 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 TMPRSS9Q7Z410 1059 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 RAB43Q86YS6 212 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 PARP8Q8N3A8 854 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 NATD1Q8N6N6 113 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 LYSMD1Q96S90 227 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 CHID1Q9BWS9 393 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 TMEM185BQ9H7F4 350 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 RPH3AQ9Y2J0 694 aaPredicted RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 FZD6O60353 706 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PRAMEF10O60809 474 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OPN1LWP04000 364 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 HIST1H1TP22492 207 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 HNRNPH1P31943 449 aaKnown RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 RORAP35398 523 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 RANBP1P43487 201 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 HSPA13P48723 471 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF33BQ06732 778 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 CD47Q08722 323 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 SNTA1Q13424 505 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 EXOSC7Q15024 291 aaKnown RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 MANEAQ5SRI9 462 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 C6orf132Q5T0Z8 1188 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 RBM44Q6ZP01 1051 aaKnown RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 NEK10Q6ZWH5 1172 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR9A2Q8NGT5 310 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR1F2PQ96R84 312 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ZDHHC5Q9C0B5 715 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PELI2Q9HAT8 420 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ANKRD10Q9NXR5 420 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR5K3A6NET4 321 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 MYL12BO14950 172 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ATP6V1G2O95670 118 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 GP1BBP13224 206 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 MC3RP41968 323 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 CCL11P51671 97 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 E2F1Q01094 437 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 C5orf22Q49AR2 442 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 LPCAT4Q643R3 524 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 TMEM154Q6P9G4 183 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 TMEM64Q6YI46 380 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 HSDL2Q6YN16 418 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 NET1Q7Z628 596 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 SETD9Q8NE22 299 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR51Q1Q8NH59 317 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 OR5P2Q8WZ92 322 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 CIDECQ96AQ7 238 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 MRPL48Q96GC5 212 aaKnown RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 CCNL2Q96S94 520 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 LRRC61Q9BV99 259 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 IFT27Q9BW83 186 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 S1PR5Q9H228 398 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 LRMDAQ9H2I8 198 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 SEC61A2Q9H9S3 476 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ZBTB26Q9HCK0 441 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PPP4R1LQ9P1A2 415 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 G3V3Y1 287 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 DLL1O00548 723 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 EMC8O43402 210 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PIAS2O75928 621 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 SLCO2B1O94956 709 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 IL33O95760 270 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 AGR2O95994 175 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 XRCC1P18887 633 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 GSTM5P46439 218 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 MYBPC1Q00872 1141 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF423Q2M1K9 1284 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 GTDC1Q4AE62 458 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 SBSNQ6UWP8 590 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PTCHD4Q6ZW05 846 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 KIAA0907Q7Z7F0 614 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 JAZF1Q86VZ6 243 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 TRIM69Q86WT6 500 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PIAS4Q8N2W9 510 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 PIGXQ8TBF5 258 aa8.04□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF317Q96PQ6 595 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms