RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 EFCAB14O75071 495 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 CCNKO75909 580 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SDHBP21912 280 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ARMCX4Q5H9R4 360 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 NDUFAF5Q5TEU4 345 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 CDC73Q6P1J9 531 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 AADATQ8N5Z0 425 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 FBXO15Q8NCQ5 510 aaPredicted RBP11.12□□□□□ -0.63
DDR1-227ENST00000376570 OR5M3Q8NGP4 307 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 INSM2Q96T92 566 aaPredicted RBP11.12□□□□□ -0.63
DDR1-227ENST00000376570 OR51I1Q9H343 314 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ZBTB20Q9HC78 741 aaPredicted RBP11.12□□□□□ -0.63
DDR1-227ENST00000376570 CLN6Q9NWW5 311 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ABCD2Q9UBJ2 740 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ZNF282Q9UDV7 671 aaPredicted RBP11.12□□□□□ -0.63
DDR1-227ENST00000376570 OR10H1Q9Y4A9 318 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 PCDHGB3Q9Y5G1 929 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 PMF1-BGLAPU3KQ54 211 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ABCA7Q8IZY2 2146 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 OR6C74A6NCV1 312 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ACOX3O15254 700 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 RNGTTO60942 597 aaKnown RBP11.12□□□□□ -0.63
DDR1-227ENST00000376570 PRSS23O95084 383 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 CCDC159P0C7I6 412 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 HPGDP15428 266 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 HTR1BP28222 390 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 CNR2P34972 360 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 GPR4P46093 362 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SLC9A3P48764 834 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 GPR19Q15760 415 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 DCUN1D3Q8IWE4 304 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 CPXM2Q8N436 756 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 HORMAD2Q8N7B1 307 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 BBS10Q8TAM1 723 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 FGF14Q92915 247 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ZNF689Q96CS4 500 aaPredicted RBP11.12□□□□□ -0.63
DDR1-227ENST00000376570 MTERF3Q96E29 417 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 PRSS16Q9NQE7 514 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 DMRT3Q9NQL9 472 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 MYO16Q9Y6X6 1858 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 LCMT2O60294 686 aaKnown RBP11.12□□□□□ -0.63
DDR1-227ENST00000376570 ABCB7O75027 752 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 GKN3PP0CG01 181 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDR1-227ENST00000376570 CDK3Q00526 305 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 MVKQ03426 396 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 IRF4Q15306 451 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SPIN4Q56A73 249 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SPANXN2Q5MJ10 180 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 LIPJQ5W064 366 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SHISA6Q6ZSJ9 500 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 USP53Q70EK8 1073 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SMPDL3AQ92484 453 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 UBE2E3Q969T4 207 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 TOX2Q96NM4 488 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 OR51E2Q9H255 320 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 CXorf36Q9H7Y0 433 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SPHK1Q9NYA1 384 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 KCMF1Q9P0J7 381 aa11.12□□□□□ -0.63
DDR1-227ENST00000376570 SPTA1P02549 2419 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 EFCAB10A6NFE3 127 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 FAM183AA6NL82 134 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 PGRMC2O15173 223 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 UGT2B11O75310 529 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 PTX3P26022 381 aaPredicted RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 HOXD12P35452 270 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 SOX3P41225 446 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 GSTM5P46439 218 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 FBXW4P57775 412 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 EMX1Q04741 257 aaPredicted RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 OTPQ5XKR4 325 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 ATG9BQ674R7 924 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 NUDT13Q86X67 352 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 OR9A2Q8NGT5 310 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 OR51A7Q8NH64 312 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 FAIM2Q9BWQ8 316 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 TMEM168Q9H0V1 697 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 FAM120CQ9NX05 1096 aaKnown RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 SIRT5Q9NXA8 310 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 SLC6A14Q9UN76 642 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 SZT2Q5T011 3432 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 SPEGQ15772 3267 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 FAM25AB3EWG3 89 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 FAM25CB3EWG5 89 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 FAM25GB3EWG6 89 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 CXCR2P25025 360 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 MC3RP41968 323 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 ALDH3B2P48448 385 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 VSX2P58304 361 aaPredicted RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 LIPKQ5VXJ0 399 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 KIAA1614Q5VZ46 1190 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 KLHDC8AQ8IYD2 350 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 GAL3ST4Q96RP7 486 aa11.11□□□□□ -0.63
DDR1-227ENST00000376570 POLR2J2Q9GZM3 115 aaKnown RBP11.11□□□□□ -0.63
DDR1-227ENST00000376570 CD320Q9NPF0 282 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms