RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 CLYBLQ8N0X4 340 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 TBC1D19Q8N5T2 526 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 TMEM156Q8N614 296 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 NINJ1Q92982 152 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 AIF1LQ9BQI0 150 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 GPATCH1Q9BRR8 931 aaKnown RBP12.2□□□□□ -0.46
CLCN6-205ENST00000376492 SPNS1Q9H2V7 528 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 RHBGQ9H310 441 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 DLL4Q9NR61 685 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 DNAJC11Q9NVH1 559 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 ZNF358Q9NW07 568 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 WWOXQ9NZC7 414 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 NUDT4Q9NZJ9 180 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 KCMF1Q9P0J7 381 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 ZFP69BQ9UJL9 534 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 ZNF223Q9UK11 482 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-205ENST00000376492 LIPGQ9Y5X9 500 aa12.2□□□□□ -0.46
CLCN6-205ENST00000376492 FBN3Q75N90 2809 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 FLNAP21333 2647 aaKnown RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 A0A1B0GTL3 188 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 H2AFYO75367 372 aaKnown RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 CTAG2O75638 210 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 MYO1DO94832 1006 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 S100BP04271 92 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 SNRPAP09012 282 aaKnown RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 C1GALT1C1LP0DN25 315 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 COL6A2P12110 1019 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 HNF4AP41235 474 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 HSPA7P48741 367 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 PPIAP62937 165 aaKnown RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 REEP5Q00765 189 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 GXYLT1Q4G148 440 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 KLC3Q6P597 504 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 ACAD11Q709F0 780 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 LIX1LQ8IVB5 337 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 ZZZ3Q8IYH5 903 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 ARFGAP2Q8N6H7 521 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 B3GNT7Q8NFL0 401 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 OR10Q1Q8NGQ4 319 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 NT5CQ8TCD5 201 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 ACMSDQ8TDX5 336 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 SREK1Q8WXA9 508 aaKnown RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 ESAMQ96AP7 390 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 TLCD1Q96CP7 247 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 POLDIP3Q9BY77 421 aaKnown RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 CD244Q9BZW8 370 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 PITHD1Q9GZP4 211 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-205ENST00000376492 VPS11Q9H270 941 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 EHD1Q9H4M9 534 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 NT5DC2Q9H857 520 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 PRDM9Q9NQV7 894 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 ST6GALNAC2Q9UJ37 374 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 FBXW2Q9UKT8 454 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 PLEKHA6Q9Y2H5 1048 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 FAM215AQ9Y5M1 114 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 ABCA4P78363 2273 aa12.19□□□□□ -0.46
CLCN6-205ENST00000376492 A0A0G2JNJ9 132 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 SUPT3HB4E1H0 165 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 TRIM49D1C9J1S8 452 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 C4orf51C9J302 202 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 G3V3Y1 287 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 UBXN8O00124 270 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 PRKNO60260 465 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-205ENST00000376492 SUPT3HO75486 399 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 GLI4P10075 376 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 ACVR2AP27037 513 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 PPP2R1BP30154 601 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 RAB8AP61006 207 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 PLGLB1Q02325 96 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 PCDH1Q08174 1060 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 FBXO48Q5FWF7 155 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 RTL6Q6ICC9 239 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 ZNF585AQ6P3V2 769 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 TMPRSS11BQ86T26 416 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 PLD6Q8N2A8 252 aaKnown RBP12.18□□□□□ -0.46
CLCN6-205ENST00000376492 ANKRD53Q8N9V6 530 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 PSD4Q8NDX1 1056 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 TRPV3Q8NET8 790 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 UTP15Q8TED0 518 aaKnown RBP12.18□□□□□ -0.46
CLCN6-205ENST00000376492 UBTD2Q8WUN7 234 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 WDR34Q96EX3 536 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 SMC6Q96SB8 1091 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 TTYH2Q9BSA4 534 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 SLC6A16Q9GZN6 736 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 LIN28AQ9H9Z2 209 aaKnown RBP12.18□□□□□ -0.46
CLCN6-205ENST00000376492 TIMMDC1Q9NPL8 285 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 Q9UFV3 132 aa12.18□□□□□ -0.46
CLCN6-205ENST00000376492 RPH3AQ9Y2J0 694 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-205ENST00000376492 TMEM200CA6NKL6 621 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 CLGNO14967 610 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 CCNT2O60583 730 aaKnown RBP12.17□□□□□ -0.46
CLCN6-205ENST00000376492 PRAMEF4O60810 478 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 OR6B1O95007 311 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 SERPINA6P08185 405 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 RBP1P09455 135 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 EPORP19235 508 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 GSTM2P28161 218 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 ADH7P40394 386 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 CASP2P42575 452 aa12.17□□□□□ -0.46
CLCN6-205ENST00000376492 CLCN2P51788 898 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms