RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TDP1Q9NUW8 608 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 LYARQ9NX58 379 aaKnown RBP11.61□□□□□ -0.55
C9orf3-203ENST00000375315 MS4A12Q9NXJ0 267 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF225Q9UK10 706 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF222Q9UK12 451 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 STUB1Q9UNE7 303 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 A0A1W2PPL8 197 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 MROH6A6NGR9 719 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 LZTS3O60299 673 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-203ENST00000375315 PRAMEF1O95521 474 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 IFNA14P01570 189 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 SCG5P05408 212 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 MMP2P08253 660 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ALPIP09923 528 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ACSM4P0C7M7 580 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ARSDP51689 593 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 MXD1Q05195 221 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 LMAN2Q12907 356 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 DUSP6Q16828 381 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 GTDC1Q4AE62 458 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 RANBP10Q6VN20 620 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 RTL4Q6ZR62 310 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 TRILQ7L0X0 811 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 FAM124AQ86V42 546 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 Q8N402 240 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 B3GNT7Q8NFL0 401 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 DNAJB8Q8NHS0 232 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 ARRDC2Q8TBH0 407 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 CYB5D2Q8WUJ1 264 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 SLC9A6Q92581 669 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 SLC25A46Q96AG3 418 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 CREB3L1Q96BA8 519 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 LINC00052Q96N35 136 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 PCTPQ9UKL6 214 aa11.61□□□□□ -0.55
C9orf3-203ENST00000375315 NYNRINQ9P2P1 1898 aaKnown RBP11.61□□□□□ -0.55
C9orf3-203ENST00000375315 WASH4PA8MWX3 477 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 KRBOX1C9JBD0 128 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ECI2O75521 394 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CDRT1O95170 752 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 MAPKAPK2P49137 400 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF81P51508 661 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ITGA1P56199 1179 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 YBEYP58557 167 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ABHD18Q0P651 414 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 HNRNPA0Q13151 305 aaKnown RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 SF3A2Q15428 464 aaKnown RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 FCN2Q15485 313 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 KLHL22Q53GT1 634 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 AFMIDQ63HM1 303 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CLDN22Q8N7P3 220 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 METTL6Q8TCB7 284 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ULK4Q96C45 1275 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 IMP4Q96G21 291 aaKnown RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 WACQ9BTA9 647 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CD244Q9BZW8 370 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 MAGEH1Q9H213 219 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CATSPERZQ9NTU4 200 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CNOT2Q9NZN8 540 aaKnown RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 GALPQ9UBC7 116 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 PTPRSQ13332 1948 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 PLXNA4Q9HCM2 1894 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 LINC01565O15544 149 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CHP2O43745 196 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ADAM11O75078 769 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 IL1AP01583 271 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 FAM157BP0CG42 384 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ANXA3P12429 323 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 TGM4P49221 684 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 AKR1D1P51857 326 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 VLDLRP98155 873 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 TUSC1Q2TAM9 212 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 TCEAL5Q5H9L2 206 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ZNF648Q5T619 568 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 SLC44A2Q8IWA5 706 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 TMEM132CQ8N3T6 1108 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 HJURPQ8NCD3 748 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 WDR48Q8TAF3 677 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CEP76Q8TAP6 659 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 UTP15Q8TED0 518 aaKnown RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 OVCA2Q8WZ82 227 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 AP3S1Q92572 193 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 PPP3R2Q96LZ3 170 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 SAMD11Q96NU1 681 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 OR52E6Q96RD3 313 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 C12orf57Q99622 126 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 CPPED1Q9BRF8 314 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 C1QTNF3Q9BXJ4 246 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 NT5DC2Q9H857 520 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 HHATLQ9HCP6 504 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 ENOPH1Q9UHY7 261 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 TMCC3Q9ULS5 477 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 NOTCH4Q99466 2003 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 NCF1BA6NI72 391 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 NCF1CA8MVU1 366 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 WNT9AO14904 365 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 NUPL2O15504 423 aaKnown RBP11.6□□□□□ -0.55
C9orf3-203ENST00000375315 HRO43593 1189 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 PRAMEF10O60809 474 aa11.6□□□□□ -0.55
C9orf3-203ENST00000375315 LDOC1O95751 146 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms