RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ZSCAN32Q9NX65 697 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TMX2-CTNND1H3BSU7 103 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 LCMT2O60294 686 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 CEACAM5P06731 702 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 JUNDP17535 347 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ITIH1P19827 911 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 HPCAP84074 193 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 EMX1Q04741 257 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 EEF1A2Q05639 463 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 NFATC3Q12968 1075 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 MAD2L1BPQ15013 274 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 KIAA1161Q6NSJ0 714 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 DHRS4L2Q6PKH6 230 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 TSEN54Q7Z6J9 526 aaKnown RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 SLC44A2Q8IWA5 706 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 OR10G2Q8NGC3 310 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 RORBQ92753 470 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 MUL1Q969V5 352 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ZBED6CLQ96FA7 236 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-202ENST00000374487 RAB11FIP5Q9BXF6 653 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 BTBD1Q9H0C5 482 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 OCEL1Q9H607 264 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 RMI1Q9H9A7 625 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF556Q9HAH1 456 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 C5AR2Q9P296 337 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ERVK-18Q9QC07 812 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 PSME2Q9UL46 239 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF451Q9Y4E5 1061 aa11.48□□□□□ -0.57
HMGCL-202ENST00000374487 A0A0G2JN53 185 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 OR52A4PA6NMU1 304 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF99A8MXY4 864 aaPredicted RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 CACNB4O00305 520 aaPredicted RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 SLC31A1O15431 190 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 RNGTTO60942 597 aaKnown RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 FAM20BO75063 409 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 INMTO95050 263 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 ANXA8P13928 327 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 NDUFV2P19404 249 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 BCKDHBP21953 392 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 NBL1P41271 181 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 SSR2P43308 183 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 RPS26P62854 115 aaKnown RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 CLCA4Q14CN2 919 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PROX2Q3B8N5 592 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF528Q3MIS6 628 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 EOGTQ5NDL2 527 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 OR4C11Q6IEV9 310 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 TNFAIP8L2Q6P589 184 aaPredicted RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 SLC5A8Q8N695 610 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 TTLQ8NG68 377 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 OR2A1Q8NGT9 310 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 NEURL3Q96EH8 262 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 KCNC2Q96PR1 638 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 GABRG3Q99928 467 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 C17orf62Q9BQA9 187 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 FUNDC2Q9BWH2 189 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 MRPS30Q9NP92 439 aaKnown RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 FZD3Q9NPG1 666 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 SLAMF7Q9NQ25 335 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 THSD1Q9NS62 852 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 ADAM29Q9UKF5 820 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 NAALAD2Q9Y3Q0 740 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PLEKHM1Q9Y4G2 1056 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 NUMA1Q14980 2115 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 ZFHX2Q9C0A1 2572 aaPredicted RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PRAMEF33A0A0G2JMD5 474 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 TRBC2A0A5B9 178 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 SCAMP1O15126 338 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 AXIN1O15169 862 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PLRG1O43660 514 aaKnown RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 TMPRSS11DO60235 418 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 TBX19O60806 448 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PRAMEF10O60809 474 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 NDUFS2O75306 463 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 CLEC3AO75596 197 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 APBB3O95704 486 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 BCL10O95999 233 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF182P17025 639 aaPredicted RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PCMT1P22061 227 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 GSTM5P46439 218 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 GSSP48637 474 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PCBP3P57721 371 aaKnown RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 SLC35A2P78381 396 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 FOXD4Q12950 439 aaPredicted RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
HMGCL-202ENST00000374487 MICAQ29983 383 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 C6orf120Q7Z4R8 191 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 P3H2Q8IVL5 708 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 LGI4Q8N135 537 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 OR2L8Q8NGY9 312 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 UBE2FQ969M7 185 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 HRASLS5Q96KN8 279 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PIP5K1AQ99755 562 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 APOOQ9BUR5 198 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 GABARAPL3Q9BY60 117 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 DUSP21Q9H596 190 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 EPS8L2Q9H6S3 715 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 LHX9Q9NQ69 397 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 TMEM184CQ9NVA4 438 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 TEX10Q9NXF1 929 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms