RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 ST8SIA4Q92187 359 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 TPD52L3Q96J77 140 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 RIOK2Q9BVS4 552 aaKnown RBP16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 SERHL2Q9H4I8 314 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 CXCL10P02778 98 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 HIST1H2AGP0C0S8 130 aaPredicted RBP16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 TNFRSF1BP20333 461 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 HIST1H2ADP20671 130 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 S100A3P33764 101 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 EVI2BP34910 448 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 CAMK2GQ13555 558 aaPredicted RBP16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 GRIN2CQ14957 1233 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 USP45Q70EL2 814 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 OR52E4Q8NGH9 312 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 HIST1H2AHQ96KK5 128 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 HIST1H2AJQ99878 128 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 H2AFJQ9BTM1 129 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 PAK6Q9NQU5 681 aaPredicted RBP16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 ZDHHC3Q9NYG2 299 aa16.51■□□□□ 0.23
LDLRAP1-201ENST00000374338 TRBV5-4A0A0C4DH59 114 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 RPS10-NUDT3A0A1W2PQS6 291 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 SLC35F4A4IF30 521 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 E7EQ34 232 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 SEC14L5O43304 696 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 FKTNO75072 461 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 ETHE1O95571 254 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 PSPHP78330 225 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 GRK1Q15835 563 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 GLYR1Q49A26 553 aaPredicted RBP16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 FAM131AQ6UXB0 335 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 MACC1Q6ZN28 852 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 SFTPA1Q8IWL2 248 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 TAGAPQ8N103 731 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 DNAJC22Q8N4W6 341 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 FIBINQ8TAL6 211 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 KLHL6Q8WZ60 621 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 RAD9AQ99638 391 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 CNPPD1Q9BV87 410 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 SLC32A1Q9H598 525 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 TRAV19A0A0A6YYK7 116 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 HOXB1P14653 301 aaPredicted RBP16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 TYRP14679 529 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 POU2F1P14859 743 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 RRAS2P62070 204 aaPredicted RBP16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 NAE1Q13564 534 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 TSTQ16762 297 aaKnown RBP16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 TOR1AIP1Q5JTV8 583 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 ADGRG3Q86Y34 549 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 TIGD4Q8IY51 512 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 UTP15Q8TED0 518 aaKnown RBP16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 ST8SIA2Q92186 375 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 WDFY2Q96P53 400 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 PITX2Q99697 317 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 SERHLQ9NQF3 203 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 OGDHLQ9ULD0 1010 aa16.5■□□□□ 0.23
LDLRAP1-201ENST00000374338 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 CLCA1A8K7I4 914 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 LINC01387J3KSC0 135 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 MYL12BO14950 172 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 GPX5O75715 221 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 RETP07949 1114 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 MYL12AP19105 171 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 AOAHP28039 575 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 SPINT3P49223 89 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 MRPL28Q13084 256 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 TTLL9Q3SXZ7 439 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 XKR6Q5GH73 641 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 PDE12Q6L8Q7 609 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 KREMEN2Q8NCW0 462 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 C7orf57Q8NEG2 295 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 COL21A1Q96P44 957 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 ASPNQ9BXN1 380 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 CLMPQ9H6B4 373 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 IFT46Q9NQC8 304 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 THUMPD1Q9NXG2 353 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 KCTD5Q9NXV2 234 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 MRPL39Q9NYK5 338 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 NOTCH4Q99466 2003 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 RFXANKO14593 260 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 TSPAN6O43657 245 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 ZNF254O75437 659 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 EBLN1P0CF75 366 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 FOSL1P15407 271 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 CCT3P49368 545 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 ST3GAL4Q11206 333 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 C6orf132Q5T0Z8 1188 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 ATCAYQ86WG3 371 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 OR2A12Q8NGT7 310 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 AP2M1Q96CW1 435 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 IL1RAPQ9NPH3 570 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 RLIMQ9NVW2 624 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 SPASTQ9UBP0 616 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 CLCA3PQ9Y6N3 262 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 WWP2O00308 870 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 SLC28A1O00337 649 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 HLA-EP13747 358 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 ATP1B2P14415 290 aaPredicted RBP16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 GPC1P35052 558 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 OLR1P78380 273 aa16.49■□□□□ 0.23
LDLRAP1-201ENST00000374338 LARS2Q15031 903 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms