RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SLC15A4Q8N697 577 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 OR2L8Q8NGY9 312 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 NDNFQ8TB73 568 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 FNDC8Q8TC99 324 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 PHF10Q8WUB8 498 aaKnown RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 PROX1Q92786 737 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 ZBED6CLQ96FA7 236 aaPredicted RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 SLC6A20Q9NP91 592 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 ZNF226Q9NYT6 803 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 LMCD1Q9NZU5 365 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 SLC17A4Q9Y2C5 497 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 KLHL33A6NCF5 533 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 FFAR1O14842 300 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 CCNB2O95067 398 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 RHCEP18577 417 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 PXNP49023 591 aaPredicted RBP17.77■□□□□ 0.44
USP49-202ENST00000373010 CCT3P49368 545 aaKnown RBP17.77■□□□□ 0.44
USP49-202ENST00000373010 HMGA2P52926 109 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 NUDT6P53370 316 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 MVKQ03426 396 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 NDUFAF5Q5TEU4 345 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 RHOXF1Q8NHV9 184 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 APOBEC4Q8WW27 367 aaKnown RBP17.77■□□□□ 0.44
USP49-202ENST00000373010 ELSPBP1Q96BH3 223 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 COPS4Q9BT78 406 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 TRMT61BQ9BVS5 477 aaKnown RBP17.77■□□□□ 0.44
USP49-202ENST00000373010 ZNF556Q9HAH1 456 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 MRPS30Q9NP92 439 aaKnown RBP17.77■□□□□ 0.44
USP49-202ENST00000373010 SCHIP1Q9P0W5 487 aaPredicted RBP17.77■□□□□ 0.44
USP49-202ENST00000373010 ADAM29Q9UKF5 820 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 SLC6A14Q9UN76 642 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 HCN4Q9Y3Q4 1203 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 CORINQ9Y5Q5 1042 aa17.77■□□□□ 0.44
USP49-202ENST00000373010 HAT1O14929 419 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 SLC31A1O15431 190 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 CD72P21854 359 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 C21orf33P30042 268 aaPredicted RBP17.77■□□□□ 0.43
USP49-202ENST00000373010 ST13P50502 369 aaKnown RBP17.77■□□□□ 0.43
USP49-202ENST00000373010 DGKEP52429 567 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 C21orf59P57076 290 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 P2RY8Q86VZ1 359 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 NATD1Q8N6N6 113 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 AQP11Q8NBQ7 271 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 ALPK1Q96QP1 1244 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 SPHK1Q9NYA1 384 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 PSORS1C1Q9UIG5 152 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 KLHL20Q9Y2M5 609 aa17.77■□□□□ 0.43
USP49-202ENST00000373010 PLRG1O43660 514 aaKnown RBP17.76■□□□□ 0.43
USP49-202ENST00000373010 MFN2O95140 757 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 LAMP2P13473 410 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 CBLP22681 906 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 VBP1P61758 197 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 KCNC4Q03721 635 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TMEM196Q5HYL7 178 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 ANKRD54Q6NXT1 300 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 FBXL6Q8N531 539 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 OR5D16Q8NGK9 328 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 MIPOL1Q8TD10 442 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 OTUB1Q96FW1 271 aaPredicted RBP17.76■□□□□ 0.43
USP49-202ENST00000373010 PLEKHA8Q96JA3 519 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 APOOQ9BUR5 198 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 GLIPR2Q9H4G4 154 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D23Q9NUY8 699 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 GALNT8Q9NY28 637 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3DA0A087WVF3 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3IA0A087WXS9 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3EA0A087X179 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3KA0A087X1G2 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 PRAMEF27A3QJZ7 478 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 OR2A25A4D2G3 310 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3FA6NER0 549 aaPredicted RBP17.76■□□□□ 0.43
USP49-202ENST00000373010 PRR19A6NJB7 356 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3LB9A6J9 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 ANHXE9PGG2 379 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 GASTP01350 101 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3HP0C7X1 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 OR12D1P0DN82 309 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 SYPL1Q16563 259 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TMEM236Q5W0B7 351 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3GQ6DHY5 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3CQ6IPX1 549 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 OLIG3Q7RTU3 272 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 TBC1D3Q8IZP1 549 aaPredicted RBP17.76■□□□□ 0.43
USP49-202ENST00000373010 DNAJC22Q8N4W6 341 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 GGHQ92820 318 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 CDCA3Q99618 268 aaPredicted RBP17.76■□□□□ 0.43
USP49-202ENST00000373010 WFDC6Q9BQY6 131 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 LMAN2LQ9H0V9 348 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 SYNPO2LQ9H987 977 aa17.76■□□□□ 0.43
USP49-202ENST00000373010 NMNAT1Q9HAN9 279 aaPredicted RBP17.76■□□□□ 0.43
USP49-202ENST00000373010 TICRRQ7Z2Z1 1910 aa17.75■□□□□ 0.43
USP49-202ENST00000373010 MDC1Q14676 2089 aaKnown RBP17.75■□□□□ 0.43
USP49-202ENST00000373010 TRBV4-1A0A0J9YWV2 114 aa17.75■□□□□ 0.43
USP49-202ENST00000373010 TOR1BO14657 336 aa17.75■□□□□ 0.43
USP49-202ENST00000373010 MRPS14O60783 128 aaKnown RBP17.75■□□□□ 0.43
USP49-202ENST00000373010 SEMA7AO75326 666 aa17.75■□□□□ 0.43
USP49-202ENST00000373010 PEBP1P30086 187 aaKnown RBP17.75■□□□□ 0.43
USP49-202ENST00000373010 GPC1P35052 558 aa17.75■□□□□ 0.43
USP49-202ENST00000373010 ADPRHP54922 357 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms