RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 C17orf50Q8WW18 174 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 CD93Q9NPY3 652 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 SLIT2O94813 1529 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 PHYHO14832 338 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 TSPAN6O43657 245 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 IFNGR1P15260 489 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 TMBIM6P55061 237 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 INCA1Q0VD86 236 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 GRM2Q14416 872 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ZFAND4Q86XD8 727 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 OR4K1Q8NGD4 311 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 NEIL3Q8TAT5 605 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 POTEKPQ9BYX7 375 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 SYT4Q9H2B2 425 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 RANBP3Q9H6Z4 567 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 J3QRK9 145 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 HTRA2O43464 458 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 ATG12O94817 140 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 DIRAS3O95661 229 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 CFL1P23528 166 aaKnown RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 ECH1Q13011 328 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 LRP8Q14114 963 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 CCDC116Q8IYX3 515 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 PEX13Q92968 403 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 FBXL8Q96CD0 374 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 P2RY13Q9BPV8 354 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 ATP6V1G1O75348 118 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 KLF8O95600 359 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■■■■■ 33.5
VCL-202ENST00000372755 SLC26A5P58743 744 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 GBX1Q14549 363 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 CHCHD4Q8N4Q1 142 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 DEFB119Q8N690 84 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 MFSD8Q8NHS3 518 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 ADAMTS18Q8TE60 1221 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 TCEAL4Q96EI5 215 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 BMFQ96LC9 184 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 PHOX2BQ99453 314 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 SLC6A7Q99884 636 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 UBQLN2Q9UHD9 624 aa11.08□□□□□ -0.64
VCL-202ENST00000372755 MAGED1Q9Y5V3 778 aaPredicted RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 BAZ2BQ9UIF8 2168 aaKnown RBP11.08□□□□□ -0.64
VCL-202ENST00000372755 FBP2O00757 339 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 PLD2O14939 933 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 CNTN5O94779 1100 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 APBB3O95704 486 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 OR1E2P47887 323 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 HS3ST5Q8IZT8 346 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 SYT17Q9BSW7 474 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 TTTY10Q9BZA0 68 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 MROH2AA6NES4 1674 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 CIB4A0PJX0 185 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 OXSR1O95747 527 aaPredicted RBP11.07□□□□□ -0.64
VCL-202ENST00000372755 AMY2BP19961 511 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 CD9P21926 228 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 ZNF81P51508 661 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 MEF2AQ02078 507 aaPredicted RBP11.07□□□□□ -0.64
VCL-202ENST00000372755 ZNF181Q2M3W8 571 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 UGT2A3Q6UWM9 527 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 VTCN1Q7Z7D3 282 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 KBTBD6Q86V97 674 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 BRI3BPQ8WY22 251 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 TM9SF4Q92544 642 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 HOXB13Q92826 284 aaPredicted RBP11.07□□□□□ -0.64
VCL-202ENST00000372755 SAMD11Q96NU1 681 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 WDR37Q9Y2I8 494 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 A0A0G2JMP0 313 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 FTCDNL1E5RQL4 147 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 DUX1O43812 170 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 SCO2O43819 266 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 CFHP08603 1231 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 IRF2P14316 349 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 HK3P52790 923 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 GSTM4Q03013 218 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 FGL1Q08830 312 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 C6orf136Q5SQH8 315 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 C3P1Q6ZMU1 363 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 CEACAM19Q7Z692 300 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 ZNF100Q8IYN0 542 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 METTL27Q8N6F8 245 aaPredicted RBP11.07□□□□□ -0.64
VCL-202ENST00000372755 OR4M2Q8NGB6 313 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 PHB2Q99623 299 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 MINDY3Q9H8M7 445 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 ICKQ9UPZ9 632 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 LEFTY1O75610 366 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 ACRV1P26436 265 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 HTR2AP28223 471 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 RPS15AP62244 130 aaKnown RBP11.07□□□□□ -0.64
VCL-202ENST00000372755 GTF2IRD2BQ6EKJ0 949 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 NANOGP8Q6NSW7 305 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 GTF2IRD2Q86UP8 949 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 LRRC25Q8N386 305 aaPredicted RBP11.07□□□□□ -0.64
VCL-202ENST00000372755 OR13C3Q8NGS6 347 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 SGTBQ96EQ0 304 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 TREX2Q9BQ50 279 aaPredicted RBP11.07□□□□□ -0.64
VCL-202ENST00000372755 BEX2Q9BXY8 128 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 NANOGQ9H9S0 305 aa11.07□□□□□ -0.64
VCL-202ENST00000372755 BEX1Q9HBH7 125 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms