RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 GALK2Q01415 458 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 MLLT11Q13015 90 aaPredicted RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 REEP3Q6NUK4 255 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 PRR23CQ6ZRP0 262 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 CAMKK1Q8N5S9 505 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 FAM181AQ8N9Y4 354 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 AUTS2Q8WXX7 1259 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 DIRAS2Q96HU8 199 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 ZIC5Q96T25 663 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 WFDC6Q9BQY6 131 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 MYNNQ9NPC7 610 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 HS3ST2Q9Y278 367 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 TMA7Q9Y2S6 64 aaKnown RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 DOCK6Q96HP0 2047 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 TMCC2O75069 709 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 APOL3O95236 402 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 SRPRAP08240 638 aaKnown RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 CTSAP10619 480 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 ILKQ13418 452 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 NCF4Q15080 339 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 FLYWCH1Q4VC44 716 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 MFSD4BQ5TF39 518 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 CCDC149Q6ZUS6 474 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 KLHDC8AQ8IYD2 350 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 HORMAD2Q8N7B1 307 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 SYT14Q8NB59 555 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 ZNF740Q8NDX6 193 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 SLC6A16Q9GZN6 736 aa15.59■□□□□ 0.09
SDC4-201ENST00000372733 SMG9Q9H0W8 520 aaKnown RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 GPBP1L1Q9HC44 474 aaPredicted RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 PLEKHB1Q9UF11 243 aaPredicted RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 RPL36Q9Y3U8 105 aaKnown RBP15.59■□□□□ 0.09
SDC4-201ENST00000372733 KIAA1671Q9BY89 1806 aa15.58■□□□□ 0.09
SDC4-201ENST00000372733 FABP12A6NFH5 140 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 NRG2O14511 850 aaPredicted RBP15.58■□□□□ 0.08
SDC4-201ENST00000372733 POP4O95707 220 aaKnown RBP15.58■□□□□ 0.08
SDC4-201ENST00000372733 URODP06132 367 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 TNNI3P19429 210 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 C1DQ13901 141 aaKnown RBP15.58■□□□□ 0.08
SDC4-201ENST00000372733 FAM214AQ32MH5 1076 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 ATAT1Q5SQI0 421 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 DCST1Q5T197 706 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 PDZK1Q5T2W1 519 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 CRIPAKQ8N1N5 446 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 VWA5B2Q8N398 1253 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 PROKR2Q8NFJ6 384 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 CREB3L4Q8TEY5 395 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 RAB8BQ92930 207 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 REPS1Q96D71 796 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 NELL2Q99435 816 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 TVP23BQ9NYZ1 205 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 TAAR2Q9P1P5 351 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 NDOR1Q9UHB4 597 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 CARD8Q9Y2G2 431 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 A0A1W2PQ45 241 aaPredicted RBP15.58■□□□□ 0.08
SDC4-201ENST00000372733 A0A1W2PQY0 241 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 SLC5A10A0PJK1 596 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 C5orf58C9J3I9 102 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 PRKYO43930 277 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 YES1P07947 543 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 TSPAN19P0C672 248 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 HEPACAMQ14CZ8 416 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 UAP1L1Q3KQV9 507 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 ASTLQ6HA08 431 aaPredicted RBP15.58■□□□□ 0.08
SDC4-201ENST00000372733 TCTN3Q6NUS6 607 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 PGBD2Q6P3X8 592 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 USP30Q70CQ3 517 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 RDH10Q8IZV5 341 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 OR4D11Q8NGI4 311 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 SLC38A5Q8WUX1 472 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 TMEM19Q96HH6 336 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 IGSF21Q96ID5 467 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 CPEB1Q9BZB8 566 aaKnown RBP15.58■□□□□ 0.08
SDC4-201ENST00000372733 POLR2J3Q9H1A7 115 aaKnown RBP15.58■□□□□ 0.08
SDC4-201ENST00000372733 MIEF1Q9NQG6 463 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 INSL5Q9Y5Q6 135 aa15.58■□□□□ 0.08
SDC4-201ENST00000372733 ZNF197O14709 1029 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 NPPBP16860 134 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 GJA1P17302 382 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 GABRR2P28476 465 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 ETV5P41161 510 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 KIR2DL3P43628 341 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 ETV1P50549 477 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 POM121L1PQ3SYA9 428 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 CCDC58Q4VC31 144 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 PYDC2Q56P42 97 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 SAXO2Q658L1 398 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 TPGS2Q68CL5 300 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 XKRXQ6PP77 449 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 GDPD4Q6W3E5 623 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 GLCCI1Q86VQ1 547 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 OR8J1Q8NGP2 316 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 BTN2A2Q8WVV5 523 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 MSLNLQ96KJ4 702 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 LMLNQ96KR4 655 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 NLNQ9BYT8 704 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 STARD7Q9NQZ5 370 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 MGAT4BQ9UQ53 548 aa15.57■□□□□ 0.08
SDC4-201ENST00000372733 PRRC2BQ5JSZ5 2229 aaKnown RBP15.57■□□□□ 0.08
SDC4-201ENST00000372733 HOXA2O43364 376 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms