RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ADCK1Q86TW2 530 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 RASGRP3Q8IV61 690 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 OXR1Q8N573 874 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 IQCF1Q8N6M8 205 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 OTULINQ96BN8 352 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 ALPK1Q96QP1 1244 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 MYNNQ9NPC7 610 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 CLDND1Q9NY35 253 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 CORO2BQ9UQ03 480 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 MTCL1Q9Y4B5 1905 aaKnown RBP11.16□□□□□ -0.62
PDE6C-201ENST00000371447 CFAP54Q96N23 3096 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 GSAPA4D1B5 854 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 SEC14L2O76054 403 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 KRT75O95678 551 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 GASTP01350 101 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 RPN2P04844 631 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 DBTP11182 482 aaKnown RBP11.16□□□□□ -0.62
PDE6C-201ENST00000371447 CD36P16671 472 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 BSGP35613 385 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 BCL6P41182 706 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 ANKRD54Q6NXT1 300 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 ZNF793Q6ZN11 406 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 UTS2BQ765I0 119 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 NUDT13Q86X67 352 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 CCDC103Q8IW40 242 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 LCN9Q8WX39 176 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 FCRL1Q96LA6 429 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 MS4A8Q9BY19 250 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 SYNPO2LQ9H987 977 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 NFKBIL1Q9UBC1 381 aaPredicted RBP11.16□□□□□ -0.62
PDE6C-201ENST00000371447 IL20RAQ9UHF4 553 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 ATG4BQ9Y4P1 393 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 PCDHGA6Q9Y5G7 932 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 SEC16AO15027 2179 aa11.16□□□□□ -0.62
PDE6C-201ENST00000371447 IGKV1-8A0A0C4DH67 115 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 ADAMDEC1O15204 470 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 SLC16A6O15403 523 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 WBP4O75554 376 aaKnown RBP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 DDCP20711 480 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 ACSL1P33121 698 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 TTKP33981 857 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 GRK3P35626 688 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 EMP3P54852 163 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 BTN3A2P78410 334 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 MLLT1Q03111 559 aaPredicted RBP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 MED22Q15528 200 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 TMEM196Q5HYL7 178 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 LCTLQ6UWM7 567 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 UNC5DQ6UXZ4 953 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 MSANTD1Q6ZTZ1 278 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 NUDT18Q6ZVK8 323 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 PAGE2Q7Z2X7 111 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 ZNF605Q86T29 641 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 LACC1Q8IV20 430 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 DEFB119Q8N690 84 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 RGMAQ96B86 450 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 RDH12Q96NR8 316 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 HHIPQ96QV1 700 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 YTHDF1Q9BYJ9 559 aaKnown RBP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 MIR1-1HGQ9H1L0 117 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 OR51I1Q9H343 314 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 SEMA3GQ9NS98 782 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 A0A1W2PPV9 198 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 C4orf51C9J302 202 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 CEACAM5P06731 702 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 HNRNPCP07910 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 COL9A1P20849 921 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 OPRL1P41146 370 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 ST13P50502 369 aaKnown RBP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 CCR3P51677 355 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 LTB4RQ15722 352 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 TOR1AIP1Q5JTV8 583 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 SDE2Q6IQ49 451 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 REEP3Q6NUK4 255 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 KLHDC8AQ8IYD2 350 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 RAB42Q8N4Z0 105 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 OR2A1Q8NGT9 310 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 RAB2BQ8WUD1 216 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 COX14Q96I36 57 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 CHST8Q9H2A9 424 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 EXOSC4Q9NPD3 245 aaKnown RBP11.15□□□□□ -0.62
PDE6C-201ENST00000371447 LHX9Q9NQ69 397 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 POLE4Q9NR33 117 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 MS4A12Q9NXJ0 267 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 GDE1Q9NZC3 331 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 DNAJC27Q9NZQ0 273 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 TBC1D29Q9UFV1 150 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 KRBA1A5PL33 1030 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 C5orf67F2Z3F1 127 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 JRKO75564 520 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 CPNE6O95741 557 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 CKMT1AP12532 417 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 PVRP15151 417 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 CD6P30203 668 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 IGFALSP35858 605 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 PIK3CBP42338 1070 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 LIM2P55344 173 aa11.15□□□□□ -0.62
PDE6C-201ENST00000371447 PUM1Q14671 1186 aaKnown RBP eCLIP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms