RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 QKIQ96PU8 341 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDR1-201ENST00000370532 CSPG4P5Q96PW8 444 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 SLITRK1Q96PX8 696 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 PFDN5Q99471 154 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 FEM1AQ9BSK4 669 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 SLC46A2Q9BY10 475 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 RBCK1Q9BYM8 510 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 ULBP1Q9BZM6 244 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 RIBC2Q9H4K1 309 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 ZFP64Q9NPA5 681 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 SPAG4Q9NPE6 437 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 FAM212BQ9NTI7 297 aaPredicted RBP4.28□□□□□ -1.72
CDR1-201ENST00000370532 SUSD2Q9UGT4 822 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 GPN3Q9UHW5 284 aaPredicted RBP4.28□□□□□ -1.72
CDR1-201ENST00000370532 MBD1Q9UIS9 605 aaPredicted RBP4.28□□□□□ -1.72
CDR1-201ENST00000370532 ANAPC2Q9UJX6 822 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 NDUFAF1Q9Y375 327 aa4.28□□□□□ -1.72
CDR1-201ENST00000370532 CDH23Q9H251 3354 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 BCLAF3A2AJT9 711 aaKnown RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 ANKDD1BA6NHY2 528 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 YJEFN3A6XGL0 299 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 PRMT5O14744 637 aaPredicted RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 AIREO43918 545 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 PLOD3O60568 738 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 ZNF217O75362 1048 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 CNTN5O94779 1100 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 MOCS2O96007 188 aaPredicted RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 IGLV3-19P01714 112 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 IFNA4P05014 189 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SPP1P10451 314 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 THRBP10828 461 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 FCGR1AP12314 374 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 HNRNPLP14866 589 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDR1-201ENST00000370532 RAB3BP20337 219 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 GPD1P21695 349 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SDC4P31431 198 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 FMO3P31513 532 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 TNFSF8P32971 234 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SPAM1P38567 509 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 ARSFP54793 590 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 DAOAP59103 153 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 DEFA6Q01524 100 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 ZNF252P-AS1Q0IIN9 211 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 FADDQ13158 208 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 MAB21L1Q13394 359 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 MADCAM1Q13477 382 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 INPP5AQ14642 412 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 HADHQ16836 314 aaKnown RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 KLHL12Q53G59 568 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 AKIRIN2Q53H80 203 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 PPM1JQ5JR12 505 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 PMS2CLQ68D20 193 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 MFSD7Q6UXD7 560 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 GPRIN1Q7Z2K8 1008 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 DPPA2Q7Z7J5 298 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SLC9B2Q86UD5 537 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 PSTKQ8IV42 348 aaKnown RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 DENND1CQ8IV53 801 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 RHOT1Q8IXI2 618 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 KATNAL2Q8IYT4 538 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 PDIK1LQ8N165 341 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 ZNF248Q8NDW4 579 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SCAMP5Q8TAC9 235 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 ING5Q8WYH8 240 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 RSPRY1Q96DX4 576 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 C14orf144Q96I85 54 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 ART5Q96L15 291 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 C10orf90Q96M02 699 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 GFM1Q96RP9 751 aaKnown RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 MCCC1Q96RQ3 725 aaPredicted RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 SLC30A3Q99726 388 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SLC30A2Q9BRI3 323 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 MND1Q9BWT6 205 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 ZYG11BQ9C0D3 744 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SLC22A4Q9H015 551 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 CARS2Q9HA77 564 aaKnown RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 SMURF2Q9HAU4 748 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 POPDC2Q9HBU9 364 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 IL1RAPQ9NPH3 570 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 INTS10Q9NVR2 710 aaKnown RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 FAM118AQ9NWS6 357 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SPHK1Q9NYA1 384 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 GTSE1Q9NYZ3 720 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 GHRLQ9UBU3 117 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 NDRG3Q9UGV2 375 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SARDHQ9UL12 918 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 USP18Q9UMW8 372 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 TRAPPC4Q9Y296 219 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 NEUROG3Q9Y4Z2 214 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 V9GYH0 126 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 CACNA1HO95180 2353 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 COL5A1P20908 1838 aaPredicted RBP4.27□□□□□ -1.73
CDR1-201ENST00000370532 ZDBF2Q9HCK1 2354 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 SERTM1A2A2V5 107 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 OR6C74A6NCV1 312 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 CLDN24A6NM45 220 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 MPTX1A8MV57 137 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 TARM1B6A8C7 271 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 KRBOX1C9JBD0 128 aa4.27□□□□□ -1.73
CDR1-201ENST00000370532 UPK1AO00322 258 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms