RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 LSM1O15116 133 aaKnown RBP12.9□□□□□ -0.34
SSR4-202ENST00000370085 LDB3O75112 727 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 SNNO75324 88 aaPredicted RBP12.9□□□□□ -0.34
SSR4-202ENST00000370085 GPR75O95800 540 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 ARRB2P32121 409 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 ASMTP46597 345 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 ALDH9A1P49189 494 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 PGDP52209 483 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 HNRNPFP52597 415 aaKnown RBP12.9□□□□□ -0.34
SSR4-202ENST00000370085 SOX8P57073 446 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 TAS2R50P59544 299 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 FOLH1Q04609 750 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 CHAF1BQ13112 559 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 MYBPC3Q14896 1274 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
SSR4-202ENST00000370085 AGAP7PQ5VUJ5 663 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 CPZQ66K79 652 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 C18orf63Q68DL7 685 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 IKBIPQ70UQ0 350 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 HPS6Q86YV9 775 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 OR4K14Q8NGD5 310 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 OR14A16Q8NHC5 309 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 CDC26Q8NHZ8 85 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 C9orf43Q8TAL5 461 aaPredicted RBP12.9□□□□□ -0.34
SSR4-202ENST00000370085 M1APQ8TC57 530 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 TM9SF4Q92544 642 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 TM4SF18Q96CE8 201 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 THOC3Q96J01 351 aaKnown RBP12.9□□□□□ -0.34
SSR4-202ENST00000370085 ART5Q96L15 291 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 AGAP4Q96P64 663 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 SORT1Q99523 831 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 EBPLQ9BY08 206 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 TUBB1Q9H4B7 451 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 MIEF1Q9NQG6 463 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 TEX10Q9NXF1 929 aaPredicted RBP12.9□□□□□ -0.34
SSR4-202ENST00000370085 DLGAP4Q9Y2H0 992 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 CCL27Q9Y4X3 112 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 PCDHA9Q9Y5H5 950 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 ZNF780BQ9Y6R6 833 aa12.9□□□□□ -0.34
SSR4-202ENST00000370085 CROCCQ5TZA2 2017 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 SAGE2PA6NJ88 616 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 GLOD5A6NK44 160 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 EIF4E1BA6NMX2 242 aaKnown RBP12.89□□□□□ -0.35
SSR4-202ENST00000370085 HDAC3O15379 428 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 FAM87AP0C7U9 286 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 PRR35P0CG20 571 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 ALOX15P16050 662 aaPredicted RBP12.89□□□□□ -0.35
SSR4-202ENST00000370085 PCSK2P16519 638 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 RPL38P63173 70 aaKnown RBP12.89□□□□□ -0.35
SSR4-202ENST00000370085 SMU1Q2TAY7 513 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 XKR7Q5GH72 579 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 VWA5B1Q5TIE3 1220 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 SLC48A1Q6P1K1 146 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 Q6ZSR9 355 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 TMEM151BQ8IW70 566 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 ST13P4Q8IZP2 240 aaPredicted RBP12.89□□□□□ -0.35
SSR4-202ENST00000370085 FAM9CQ8IZT9 166 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 FNDC5Q8NAU1 212 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 TMEM52Q8NDY8 209 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 DNAJB14Q8TBM8 379 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 C16orf78Q8WTQ4 265 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 C11orf24Q96F05 449 aaPredicted RBP12.89□□□□□ -0.35
SSR4-202ENST00000370085 IMMP1LQ96LU5 166 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 MMP25Q9NPA2 562 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 MYNNQ9NPC7 610 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.89□□□□□ -0.35
SSR4-202ENST00000370085 EHD3Q9NZN3 535 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 COPS7AQ9UBW8 275 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 MAPRE3Q9UPY8 281 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 ENTPD4Q9Y227 616 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 EIF3LQ9Y262 564 aaKnown RBP12.89□□□□□ -0.35
SSR4-202ENST00000370085 ZNF451Q9Y4E5 1061 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 POLR3HQ9Y535 204 aaPredicted RBP12.89□□□□□ -0.35
SSR4-202ENST00000370085 PTGDR2Q9Y5Y4 395 aa12.89□□□□□ -0.35
SSR4-202ENST00000370085 ATMQ13315 3056 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 ZFYVE26Q68DK2 2539 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 IGSF10Q6WRI0 2623 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 IGHV3-20A0A0C4DH32 117 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 A8MUA0 341 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 ATXN7O15265 892 aaPredicted RBP12.88□□□□□ -0.35
SSR4-202ENST00000370085 FGF17O60258 216 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 PEX11AO75192 247 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 ERAL1O75616 437 aaKnown RBP12.88□□□□□ -0.35
SSR4-202ENST00000370085 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 CEACAM4O75871 244 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 DNAJB5O75953 348 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 IL3P08700 152 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 SLC35E2P0CK97 266 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 PRPS2P11908 318 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 PORP16435 677 aaPredicted RBP12.88□□□□□ -0.35
SSR4-202ENST00000370085 GALNSP34059 522 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 RPL3P39023 403 aaKnown RBP12.88□□□□□ -0.35
SSR4-202ENST00000370085 STT3AP46977 705 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 EFNA3P52797 238 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 SLC26A5P58743 744 aa12.88□□□□□ -0.35
SSR4-202ENST00000370085 RAE1P78406 368 aaKnown RBP12.88□□□□□ -0.35
SSR4-202ENST00000370085 IGLV3-21P80748 117 aaPredicted RBP12.88□□□□□ -0.35
SSR4-202ENST00000370085 OCRLQ01968 901 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms