RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 C4orf47A7E2U8 309 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 PLPP1O14494 284 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 CAPN5O15484 640 aaPredicted RBP16.4■□□□□ 0.22
UBE3D-203ENST00000369747 FLRT2O43155 660 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 SH3BP5O60239 455 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 LRP3O75074 770 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 ABCB1P08183 1280 aaPredicted RBP16.4■□□□□ 0.22
UBE3D-203ENST00000369747 NUDT7P0C024 238 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 PPIBP23284 216 aaKnown RBP16.4■□□□□ 0.22
UBE3D-203ENST00000369747 CXCR2P25025 360 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 KDELR2P33947 212 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 RPL3P39023 403 aaKnown RBP16.4■□□□□ 0.22
UBE3D-203ENST00000369747 CYP4F2P78329 520 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 DAB2P98082 770 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 RGNQ15493 299 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 DEPDC1Q5TB30 811 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 ZNF425Q6IV72 752 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 FAM92BQ6ZTR7 304 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 TMEM179BQ7Z7N9 219 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 GALNT10Q86SR1 603 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 HS3ST5Q8IZT8 346 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 SVOPLQ8N434 492 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 PPCDCQ96CD2 204 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 TGM7Q96PF1 710 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 SPATA9Q9BWV2 254 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 GRIP2Q9C0E4 1043 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 SYNPO2LQ9H987 977 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 CORO2BQ9UQ03 480 aa16.4■□□□□ 0.22
UBE3D-203ENST00000369747 SMIM31A0A1B0GVY4 71 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 GNGT2O14610 69 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 LCMT2O60294 686 aaKnown RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 OR6B1O95007 311 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 SEMA3DO95025 777 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 ZNF682O95780 498 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 C6orf47O95873 294 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 HPRP00739 348 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 IL3P08700 152 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 CSF2RBP32927 897 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 VEZF1Q14119 521 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 NADK2Q4G0N4 442 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 KHDRBS2Q5VWX1 349 aaKnown RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 OFCC1Q8IZS5 231 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 OR6C4Q8NGE1 309 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 MTERF3Q96E29 417 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 FCRL4Q96PJ5 515 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 MAP3K3Q99759 626 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 CCDC3Q9BQI4 270 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 NT5DC2Q9H857 520 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 CLK4Q9HAZ1 481 aaKnown RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 TMEM9Q9P0T7 183 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 KLHL3Q9UH77 587 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 H0YAE9 185 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 HAT1O14929 419 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 SEMG1P04279 462 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 NTRK1P04629 796 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 ST6GAL1P15907 406 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 PNLIPP16233 465 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 MVDP53602 400 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 GPLD1P80108 840 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 PPP1R8Q12972 351 aaKnown RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 SPIDRQ14159 915 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 ZIC1Q15915 447 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 SLC5A12Q1EHB4 618 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 CNPY1Q3B7I2 92 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 ZIK1Q3SY52 487 aaPredicted RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 FCRL6Q6DN72 434 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 IKBIPQ70UQ0 350 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 PATL1Q86TB9 770 aaKnown RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 ZDHHC21Q8IVQ6 265 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 MMP21Q8N119 569 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 IFI44Q8TCB0 444 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 NAT6Q93015 286 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 CNDP2Q96KP4 475 aaKnown RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 F2RL3Q96RI0 385 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 OSBPL10Q9BXB5 764 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 PITHD1Q9GZP4 211 aaPredicted RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 SMURF2Q9HAU4 748 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 TMEM184CQ9NVA4 438 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 GPATCH2Q9NW75 528 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 AHSPQ9NZD4 102 aa16.39■□□□□ 0.21
UBE3D-203ENST00000369747 MDC1Q14676 2089 aaKnown RBP16.39■□□□□ 0.21
UBE3D-203ENST00000369747 GVINP1Q7Z2Y8 2422 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 A0A0J9YY10 115 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 A0A1W2PQM1 296 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 RTCAO00442 366 aaKnown RBP16.38■□□□□ 0.21
UBE3D-203ENST00000369747 OR1F1O43749 312 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 DUX1O43812 170 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 CTSVO60911 334 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 ALBP02768 609 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 THRBP10828 461 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 BSGP35613 385 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 DCTP40126 519 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 NR1H2P55055 460 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 PPP2R2BQ00005 443 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 MYBPC3Q14896 1274 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 CCNYL2Q5T2Q4 361 aa16.38■□□□□ 0.21
UBE3D-203ENST00000369747 TTC33Q6PID6 262 aaPredicted RBP16.38■□□□□ 0.21
UBE3D-203ENST00000369747 FIGLAQ6QHK4 219 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms