RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 GPALPP1Q8IXQ4 340 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 OR52P1PQ8NH57 321 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 SHKBP1Q8TBC3 707 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 HERPUD2Q9BSE4 406 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 RFXAPO00287 272 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 RPS15AP62244 130 aaKnown RBP12.34□□□□□ -0.43
PTPRK-207ENST00000368226 MAD2L1BPQ15013 274 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-207ENST00000368226 OCLNQ16625 522 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 KIAA1614Q5VZ46 1190 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 FCRLBQ6BAA4 426 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 GALNT11Q8NCW6 608 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 NXPE2Q96DL1 559 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 R3HDMLQ9H3Y0 253 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 TMEM185BQ9H7F4 350 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 POU2F3Q9UKI9 436 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 RARRES3Q9UL19 164 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 CIB4A0PJX0 185 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 L7N2F9 121 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 M0QZQ0 153 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 EMC8O43402 210 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 SEMA3DO95025 777 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 P2RY2P41231 377 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 VAMP2P63027 116 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 EMC10Q5UCC4 262 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 TMEM236Q5W0B7 351 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 CES4AQ5XG92 561 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 C6orf120Q7Z4R8 191 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 KLHDC8AQ8IYD2 350 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 CIDECQ96AQ7 238 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-207ENST00000368226 G6PC3Q9BUM1 346 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 C8orf33Q9H7E9 229 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-207ENST00000368226 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 NRXN3Q9Y4C0 1643 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 TP53I11O14683 189 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 ENTPD6O75354 484 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 SLC16A8O95907 504 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 ADAM17P78536 824 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 SLC36A3Q495N2 470 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 OR8H3Q8N146 312 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 DIO2Q92813 273 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 OSTF1Q92882 214 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-207ENST00000368226 PCDHGB1Q9Y5G3 927 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 ANHXE9PGG2 379 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 SNAP29O95721 258 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 LIPIQ6XZB0 460 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 Q6ZSR6 202 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 KCTD9Q7L273 389 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 BBS10Q8TAM1 723 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 FBXL8Q96CD0 374 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 CXXC1Q9P0U4 656 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-207ENST00000368226 DNAJC25-GNG10A0A024R161 153 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 HTR3EA5X5Y0 456 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 UNC119BA6NIH7 251 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 SLC16A5O15375 505 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 BCAS2O75934 225 aaPredicted RBP12.33□□□□□ -0.43
PTPRK-207ENST00000368226 ETFAP13804 333 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 IL4RP24394 825 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 CERS1P27544 350 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 OXTRP30559 389 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 HTR6P50406 440 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 TPTEP56180 551 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 CD83Q01151 205 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 CBLBQ13191 982 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 ANKDD1AQ495B1 522 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF551Q7Z340 670 aaPredicted RBP12.33□□□□□ -0.43
PTPRK-207ENST00000368226 ZIC5Q96T25 663 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 CCDC106Q9BWC9 280 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 C12orf4Q9NQ89 552 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 POLE3Q9NRF9 147 aa12.33□□□□□ -0.43
PTPRK-207ENST00000368226 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 C1orf226A1L170 272 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 RNH1P13489 461 aaKnown RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 AK4P27144 223 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 HNRNPKP61978 463 aaKnown RBP eCLIP12.33□□□□□ -0.445e-7■■■■□ 23.3
PTPRK-207ENST00000368226 LMNTD1Q8N9Z9 388 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 CEP76Q8TAP6 659 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 APIPQ96GX9 242 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 MS4A4AQ96JQ5 239 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 KCNK13Q9HB14 408 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 ASB6Q9NWX5 421 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 MGAT4AQ9UM21 535 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 RAB28P51157 221 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 KIAA0319Q5VV43 1072 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 ENPP6Q6UWR7 440 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 MRPL10Q7Z7H8 261 aaKnown RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 FAM86B1Q8N7N1 296 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 BORCS8Q96FH0 119 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 RPH3AQ9Y2J0 694 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 ADAM12O43184 909 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 PEPDP12955 493 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 EN2P19622 333 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 RBMS1P29558 406 aaKnown RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF550Q7Z398 422 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms