RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 POLR2J2Q9GZM3 115 aaKnown RBP11.08□□□□□ -0.64
SYNE1-204ENST00000367248 C14orf105Q9NVL8 296 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 LHX3Q9UBR4 397 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 PEPDP12955 493 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 CDK3Q00526 305 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 STK11Q15831 433 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 DNM1P34Q6PK57 102 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 TMEM107Q6UX40 140 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 TMPPEQ6ZT21 453 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 FCGR1BQ92637 280 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 PREBQ9HCU5 417 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 NLGN3Q9NZ94 848 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
SYNE1-204ENST00000367248 SLC9B1P1A6NJY1 282 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 GPR89AB7ZAQ6 455 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 SOX30O94993 753 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 OPN1LWP04000 364 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 GPR89BP0CG08 455 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 PAX7P23759 505 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 SH3BP2P78314 561 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 IRF4Q15306 451 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 KANK2Q63ZY3 851 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 FAM131AQ6UXB0 335 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 HSDL2Q6YN16 418 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 IKBIPQ70UQ0 350 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 KDM1BQ8NB78 822 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 OR2A12Q8NGT7 310 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 MICAL3Q7RTP6 2002 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 PORP16435 677 aaPredicted RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 CLRN1P58418 232 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 CTC1Q2NKJ3 1217 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 OR4C11Q6IEV9 310 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 DKK3Q9UBP4 350 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 EPHA6Q9UF33 1036 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 NWD2Q9ULI1 1742 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 HHLA1C9JL84 531 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 SMSP52788 366 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 MXD1Q05195 221 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 PON3Q15166 354 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 CRTC2Q53ET0 693 aaPredicted RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 NKAIN2Q5VXU1 208 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 NUP43Q8NFH3 380 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 NT5C3BQ969T7 300 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 CD180Q99467 661 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 G6PC3Q9BUM1 346 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 TM9SF3Q9HD45 589 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 MAP1BP46821 2468 aaKnown RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 KIR2DS5A0A0G2JLQ3 304 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 A0A0G2JNG1 304 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 KIR2DS3K7RE56 304 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF33BQ06732 778 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 KIR2DS5Q14953 304 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 TXLNGYQ9BZA5 131 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 FCER2P06734 321 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 MAGP20916 626 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 SDC2P34741 201 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 ERVPABLB-1P60509 514 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 ADAM17P78536 824 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 ACY1Q03154 408 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 OR13J1Q8NGT2 312 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 RLN1P04808 185 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 OR12D1P0DN82 309 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 ENDOUP21128 410 aaKnown RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 KDELR2P33947 212 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 TXNL4AP83876 142 aaKnown RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 CTBSQ01459 385 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 PLP2Q04941 152 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 FOXC1Q12948 553 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF846Q147U1 533 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF550Q7Z398 422 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 C9orf43Q8TAL5 461 aaPredicted RBP11.07□□□□□ -0.64
SYNE1-204ENST00000367248 DIRAS2Q96HU8 199 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 RBP7Q96R05 134 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 KLHL42Q9P2K6 505 aa11.07□□□□□ -0.64
SYNE1-204ENST00000367248 SNPHO15079 494 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF3P17036 446 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 IL12AP29459 219 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 CBX5P45973 191 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 MAZP56270 477 aaKnown RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 RASGEF1BQ0VAM2 473 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 PNCKQ6P2M8 343 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 BLOC1S3Q6QNY0 202 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 SLC15A3Q8IY34 581 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF676Q8N7Q3 588 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 NPLQ9BXD5 320 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 OBP2AQ9NY56 170 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 CSTAP01040 98 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 NR4A1P22736 598 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 SLC35F1Q5T1Q4 408 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 OLFML2AQ68BL7 652 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 COMMD6Q7Z4G1 85 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 C6orf120Q7Z4R8 191 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 TMEM234Q8WY98 164 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 UFD1Q92890 307 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 PTERQ96BW5 349 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 PHF7Q9BWX1 381 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 SOX17Q9H6I2 414 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms