RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ZNF670-ZNF695F2Z2N8 137 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 GADD45AP24522 165 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 BDKRB1P46663 353 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 BLKP51451 505 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 CLCN7P51798 805 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 BTBD16Q32M84 506 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 AGAP7PQ5VUJ5 663 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ISG20Q96AZ6 181 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ACTL8Q9H568 366 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 HHATLQ9HCP6 504 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 PET100P0DJ07 73 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 EMX1Q04741 257 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 C4orf46Q504U0 113 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 MPP7Q5T2T1 576 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 CST11Q9H112 138 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 NT5DC2Q9H857 520 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF639Q9UID6 485 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 HMX2A2RU54 273 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 C7orf72A4D263 438 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 LRRC14BA6NHZ5 514 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 STC2O76061 302 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 HOXD12P35452 270 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 GMPRP36959 345 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 RASGEF1BQ0VAM2 473 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 PDGFRLQ15198 375 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ALKAL1Q6UXT8 129 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 FRS2Q8WU20 508 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 PLEKHA1Q9HB21 404 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 TAS2R8Q9NYW2 309 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 DRGXA6NNA5 263 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 CCL16O15467 120 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 PPM1BO75688 479 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 RPS5P46782 204 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ARHGDIBP52566 201 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 WNT4P56705 351 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBPL1P62380 186 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 DPY19L3Q6ZPD9 716 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ASB18Q6ZVZ8 466 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ARMCX6Q7L4S7 300 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 RETREG3Q86VR2 466 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 NDUFB5O43674 189 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ADH5P11766 374 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 IFI30P13284 250 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 TMEM115Q12893 351 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 KIF18BQ86Y91 864 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 LSMEM2Q8N112 164 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 UBE2J2Q8N2K1 259 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 C14orf119Q9NWQ9 140 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D24Q9ULP9 559 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 MAU2Q9Y6X3 613 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 NCOR1O75376 2440 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 PRODHO43272 600 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ELAVL3Q14576 367 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 BPIFB1Q8TDL5 484 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 MOCOSQ96EN8 888 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 CPNE2Q96FN4 548 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF300Q96RE9 604 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF69Q9UC07 566 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 TLX3O43711 291 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ATE1O95260 518 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 ACPPP15309 386 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 RGS6P49758 472 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 HSD17B12Q53GQ0 312 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 TBC1D15Q8TC07 691 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 WDR45Q9Y484 360 aa11.3□□□□□ -0.6
CDC42BPA-202ENST00000366764 SPINT3P49223 89 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 RPA4Q13156 261 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 LASP1Q14847 261 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ARHGAP19Q14CB8 494 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 SLC5A8Q8N695 610 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 CELF5Q8N6W0 485 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR8J2Q8NGG1 315 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 POTEKPQ9BYX7 375 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 EVA1AQ9H8M9 152 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 TMEM14AQ9Y6G1 99 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 IL1AP01583 271 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 CBX5P45973 191 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 C7orf50Q9BRJ6 194 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 L7N2F9 121 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 SCN2BO60939 215 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ITPKBP27987 946 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 AGTR1P30556 359 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 MAP3K8P41279 467 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR1E2P47887 323 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 CLCNKAP51800 687 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ABCG5Q9H222 651 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 KCNJ13O60928 360 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 SMIM18P0DKX4 95 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 MYOFQ9NZM1 2061 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 LAMP1P11279 417 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 RPL34P49207 117 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 NDNFQ8TB73 568 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms