RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 SAMD11Q96NU1 681 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 RNF208Q9H0X6 261 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 ZDHHC3Q9NYG2 299 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 ACSL6Q9UKU0 697 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 CCL26Q9Y258 94 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 YARS2Q9Y2Z4 477 aaKnown RBP18.73■□□□□ 0.59
TRIM58-201ENST00000366481 NINQ8N4C6 2090 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 GON4LQ3T8J9 2241 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 ZNF670-ZNF695F2Z2N8 137 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 INMT-MINDY4F8WBC2 141 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 KPNA5O15131 536 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 SRCP12931 536 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 NOGQ13253 232 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 GAREM2Q75VX8 874 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 C17orf62Q9BQA9 187 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 CDCA4Q9BXL8 241 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 NIPAL2Q9H841 368 aa18.73■□□□□ 0.59
TRIM58-201ENST00000366481 GNG14A0A1W2PPG7 69 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 CSO75390 466 aaKnown RBP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 GPX2P18283 190 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 HLA-FP30511 346 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 BDKRB1P46663 353 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 MEF2AQ02078 507 aaPredicted RBP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 ACSM2AQ08AH3 577 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 ACSM2BQ68CK6 577 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 LHX8Q68G74 356 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 ZNF852Q6ZMS4 543 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 SYT14Q8NB59 555 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 C2orf15Q8WU43 125 aaKnown RBP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 PKP4Q99569 1192 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 DUSP26Q9BV47 211 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 BRD9Q9H8M2 597 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 ING4Q9UNL4 249 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 TRBV5-4A0A0C4DH59 114 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 FABP7O15540 132 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 LRRTM2O43300 516 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 ETFAP13804 333 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 HLA-DMAP28067 261 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 ETV3P41162 512 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 FGFBP1Q14512 234 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 GALNT11Q8NCW6 608 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 OR5AK3PQ8NH89 298 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 TMEM169Q96HH4 297 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 TLR4O00206 839 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 LYRM1O43325 122 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 OR56A5P0C7T3 313 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 CSTF2P33240 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 TAGLNQ01995 201 aaKnown RBP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 SRSF11Q05519 484 aaKnown RBP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 NCF4Q15080 339 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 PDZD3Q86UT5 571 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 C1orf52Q8N6N3 182 aaKnown RBP18.72■□□□□ 0.59
TRIM58-201ENST00000366481 LRRC17Q8N6Y2 441 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 TMEM80Q96HE8 168 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 RACGAP1Q9H0H5 632 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 MGAT4AQ9UM21 535 aa18.72■□□□□ 0.59
TRIM58-201ENST00000366481 PRAMEF33A0A0G2JMD5 474 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 PRAMEF10O60809 474 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 IGFBP1P08833 259 aaPredicted RBP18.71■□□□□ 0.59
TRIM58-201ENST00000366481 CHMP24386 653 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 RRAS2P62070 204 aaPredicted RBP18.71■□□□□ 0.59
TRIM58-201ENST00000366481 SELENOWP63302 87 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 CPTPQ5TA50 214 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 MLIPQ5VWP3 458 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 SLC51BQ86UW2 128 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 TCEANCQ8N8B7 351 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 ZFP41Q8N8Y5 198 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 MED28Q9H204 178 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 MIXL1Q9H2W2 232 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 TMEM245Q9H330 911 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 SUV39H2Q9H5I1 410 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 DNAJC11Q9NVH1 559 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 MAP4K5Q9Y4K4 846 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 PCDHB11Q9Y5F2 797 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 FADS2P1A8MWK0 482 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 C1SP09871 688 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 ARSBP15848 533 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 GSTM5P46439 218 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 TM4SF4P48230 202 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 SRP54P61011 504 aaKnown RBP18.71■□□□□ 0.59
TRIM58-201ENST00000366481 CNIH2Q6PI25 160 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 OR4A15Q8NGL6 344 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 CREB3L4Q8TEY5 395 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 KCTD7Q96MP8 289 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 NELL2Q99435 816 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 SLC29A3Q9BZD2 475 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 TXNL4BQ9NX01 149 aaKnown RBP18.71■□□□□ 0.59
TRIM58-201ENST00000366481 NUP50Q9UKX7 468 aa18.71■□□□□ 0.59
TRIM58-201ENST00000366481 MGAT4DA6NG13 374 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 DDCP20711 480 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 SOAT1P35610 550 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 CRYBB2P43320 205 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 CRISP1P54107 249 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.7■□□□□ 0.586e-8■□□□□ 8.3
TRIM58-201ENST00000366481 TPRG1Q6ZUI0 275 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 NFKBIDQ8NI38 313 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 CYB5D2Q8WUJ1 264 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 ASB11Q8WXH4 323 aa18.7■□□□□ 0.58
TRIM58-201ENST00000366481 TTC9Q92623 222 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms