RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 RNF19AQ9NV58 838 aa11.08□□□□□ -0.64
CNOT4-203ENST00000361528 AFF4Q9UHB7 1163 aaKnown RBP11.08□□□□□ -0.64
CNOT4-203ENST00000361528 PLEKHA6Q9Y2H5 1048 aa11.08□□□□□ -0.64
CNOT4-203ENST00000361528 DNMT3AQ9Y6K1 912 aaPredicted RBP11.08□□□□□ -0.64
CNOT4-203ENST00000361528 PIAS3Q9Y6X2 628 aa11.08□□□□□ -0.64
CNOT4-203ENST00000361528 DISC1C4P0D8 188 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 PRAF2O60831 178 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CILPO75339 1184 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ZNF682O95780 498 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 GLP2RO95838 553 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 URODP06132 367 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 HOXC4P09017 264 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 LCP1P13796 627 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 DRD2P14416 443 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CPEP16870 476 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 SLC6A4P31645 630 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CTNNB1P35222 781 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 SCNN1AP37088 669 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 PTPRCAPQ14761 206 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 SEC23BQ15437 767 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ZNF667Q5HYK9 610 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 MSRB3Q8IXL7 192 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 FAM217AQ8IXS0 508 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CRYBG2Q8N1P7 616 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 BPIFCQ8NFQ6 507 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 SVIPQ8NHG7 77 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 C2CD4CQ8TF44 421 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ACOT12Q8WYK0 555 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.649e-7■■■■□ 20.1
CNOT4-203ENST00000361528 C12orf42Q96LP6 360 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 TSNAXQ99598 290 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 SSX3Q99909 188 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 WDR77Q9BQA1 342 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 C7orf50Q9BRJ6 194 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 INPP5KQ9BT40 448 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 C1QTNF3Q9BXJ4 246 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 POLR2J2Q9GZM3 115 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ACTL8Q9H568 366 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 GHRLQ9UBU3 117 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 MRTO4Q9UKD2 239 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 OR6C75A6NL08 312 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 HMSDA8MTL9 139 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 PSMD9O00233 223 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 PRKYO43930 277 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 PRAMEF2O60811 474 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 HEXBP07686 556 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 GIPP09681 153 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CD1DP15813 335 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 MUC1P15941 1255 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 AHCYP23526 432 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 PAX6P26367 422 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 MAPK3P27361 379 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ZP1P60852 638 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CCINQ13939 588 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ST3GAL2Q16842 350 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ZNF648Q5T619 568 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 SYPL2Q5VXT5 272 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 PDE12Q6L8Q7 609 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 TSPAN33Q86UF1 283 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CMIPQ8IY22 773 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 NANOGP1Q8N7R0 232 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CNOT9Q92600 299 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 FAM193BQ96PV7 902 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CPPED1Q9BRF8 314 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 THAP7Q9BT49 309 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ELOVL4Q9GZR5 314 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 POLR3FQ9H1D9 316 aaPredicted RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 NSUN3Q9H649 340 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 FZD3Q9NPG1 666 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 TREX1Q9NSU2 369 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 SLC25A37Q9NYZ2 338 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 ASH2LQ9UBL3 628 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 FZD10Q9ULW2 581 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 CLEC4AQ9UMR7 237 aa11.07□□□□□ -0.64
CNOT4-203ENST00000361528 AAR2Q9Y312 384 aaKnown RBP11.07□□□□□ -0.64
CNOT4-203ENST00000361528 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
CNOT4-203ENST00000361528 MICAL3Q7RTP6 2002 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 J3KR12 359 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 FFAR3O14843 346 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 GPR42O15529 346 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 RBBP9O75884 186 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 ALDOBP05062 364 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 NFICP08651 508 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 CD53P19397 219 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 POU3F2P20265 443 aaPredicted RBP11.06□□□□□ -0.64
CNOT4-203ENST00000361528 FGF9P31371 208 aaPredicted RBP11.06□□□□□ -0.64
CNOT4-203ENST00000361528 CTSCP53634 463 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 RAP2BP61225 183 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 MLLT1Q03111 559 aaPredicted RBP11.06□□□□□ -0.64
CNOT4-203ENST00000361528 SLC3A1Q07837 685 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 PICALMQ13492 652 aa11.06□□□□□ -0.64
CNOT4-203ENST00000361528 ALKBH1Q13686 389 aaKnown RBP11.06□□□□□ -0.64
CNOT4-203ENST00000361528 SPDYE7PQ495Y7 208 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms