RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ZNF33BQ06732 778 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 EGFL6Q8IUX8 553 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 OR8H1Q8NGG4 311 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 DOK4Q8TEW6 326 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 TSEN15Q8WW01 171 aaKnown RBP15.62■□□□□ 0.09
SCAF1-201ENST00000360565 GAB3Q8WWW8 586 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 ISG20Q96AZ6 181 aaKnown RBP15.62■□□□□ 0.09
SCAF1-201ENST00000360565 TCEAL4Q96EI5 215 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 GAL3ST1Q99999 423 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 KLHL42Q9P2K6 505 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 OR1A2Q9Y585 309 aa15.62■□□□□ 0.09
SCAF1-201ENST00000360565 KAT7O95251 611 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 RAB36O95755 333 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 AHCYP23526 432 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 PPP2R2DQ66LE6 453 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 LIPIQ6XZB0 460 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 LMNTD1Q8N9Z9 388 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 BBS10Q8TAM1 723 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 ZNF300Q96RE9 604 aaPredicted RBP15.61■□□□□ 0.09
SCAF1-201ENST00000360565 ELL3Q9HB65 397 aaPredicted RBP15.61■□□□□ 0.09
SCAF1-201ENST00000360565 PHF24Q9UPV7 400 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 HNRNPA1P09651 372 aaKnown RBP eCLIP15.61■□□□□ 0.09
SCAF1-201ENST00000360565 ZNF3P17036 446 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 TM4SF4P48230 202 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 KHDRBS2Q5VWX1 349 aaKnown RBP15.61■□□□□ 0.09
SCAF1-201ENST00000360565 C7orf57Q8NEG2 295 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 NUP43Q8NFH3 380 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 OR4K14Q8NGD5 310 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 ECHDC3Q96DC8 303 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 PDCD10Q9BUL8 212 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 COMMD9Q9P000 198 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 M0R129 80 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 GBX2P52951 348 aaPredicted RBP15.61■□□□□ 0.09
SCAF1-201ENST00000360565 HYAL2Q12891 473 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 PAPD5Q8NDF8 572 aaKnown RBP15.61■□□□□ 0.09
SCAF1-201ENST00000360565 OR10H5Q8NGA6 315 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 OR4K5Q8NGD3 323 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 OSTF1Q92882 214 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 DSN1Q9H410 356 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 BTNL2Q9UIR0 455 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 CDH7Q9ULB5 785 aa15.61■□□□□ 0.09
SCAF1-201ENST00000360565 KLHL33A6NCF5 533 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 B4GALT2O60909 372 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 TYRP1P17643 537 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 ACSL1P33121 698 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 FAUP35544 74 aaKnown RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 DSG2Q14126 1118 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 FAM26DQ5JW98 314 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 HMBOX1Q6NT76 420 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 TMEM107Q6UX40 140 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 RSPO2Q6UXX9 243 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 SPRED1Q7Z699 444 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 PMEPA1Q969W9 287 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 TESCQ96BS2 214 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 CPEB1Q9BZB8 566 aaKnown RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 TRIM36Q9NQ86 728 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 NUP214P35658 2090 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 A0A1W2PQU0 124 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 REM1O75628 298 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 DCDC1P59894 354 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 EMX1Q04741 257 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 SMN1Q16637 294 aaKnown RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 FAM214AQ32MH5 1076 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 DENND6BQ8NEG7 585 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 ZNF480Q8WV37 535 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 NDC1Q9BTX1 674 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 SORBS1Q9BX66 1292 aaKnown RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 BRF2Q9HAW0 419 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 MAFFQ9ULX9 164 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 ELOA3DA6NLF2 546 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 B4DGG1 531 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 NOS1APO75052 506 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 CPNE3O75131 537 aaKnown RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 FHP07954 510 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 DCKP27707 260 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 BLKP51451 505 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 MAD2L1BPQ15013 274 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 ELOA3BQ3SY89 546 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 RPS26P11Q5JNZ5 115 aaPredicted RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.6■□□□□ 0.09
SCAF1-201ENST00000360565 ELOA3Q8NG57 546 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 TCF7L1Q9HCS4 588 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 FAIMQ9NVQ4 179 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 NLGN3Q9NZ94 848 aa15.6■□□□□ 0.09
SCAF1-201ENST00000360565 A8MUA0 341 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 H7C0S8 307 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 NUDT7P0C024 238 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 PFKLP17858 780 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 PTGES3Q15185 160 aaKnown RBP15.59■□□□□ 0.09
SCAF1-201ENST00000360565 ITPRIPL2Q3MIP1 535 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 PHOX2BQ99453 314 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 WACQ9BTA9 647 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 CWH43Q9H720 699 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 ABCD2Q9UBJ2 740 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 SHANK3Q9BYB0 1731 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 C2orf92A0A1B0GVN3 265 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 OR6C70A6NIJ9 312 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 TIMP2P16035 220 aa15.59■□□□□ 0.09
SCAF1-201ENST00000360565 RNF144AP50876 292 aaPredicted RBP15.59■□□□□ 0.09
SCAF1-201ENST00000360565 PPP5CP53041 499 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms