RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 DGKQP52824 942 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC22A10Q63ZE4 541 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 OR9A4Q8NGU2 314 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 SNAPC3Q92966 411 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 MSI2Q96DH6 328 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM74Q96NL1 305 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 SALL4Q9UJQ4 1053 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 NDUFS4O43181 175 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ALPIP09923 528 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CKMT1AP12532 417 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF30P17039 623 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 AKR1C4P17516 323 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 L1CAMP32004 1257 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 GPR68Q15743 365 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 DUOXA1Q1HG43 343 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM220Q6QAJ8 160 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 BMFQ96LC9 184 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 SYT3Q9BQG1 590 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 REEP4Q9H6H4 257 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 IL36AQ9UHA7 158 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 GPR160Q9UJ42 338 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 KCNQ2O43526 872 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 JUNP05412 331 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 IRF5Q13568 498 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 MPP7Q5T2T1 576 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 KCT2Q8NC54 265 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 LILRB4Q8NHJ6 448 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 FAM84AQ96KN4 292 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 TTTY10Q9BZA0 68 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 NRXN1Q9ULB1 1477 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 A0A1W2PP18 115 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 FAM170BA6NMN3 283 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 GABRDO14764 452 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CAPN5O15484 640 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CHRNB2P17787 502 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 NFATC3Q12968 1075 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 FAM109AQ8N4B1 249 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM233B4DJY2 109 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CHATP28329 748 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 CD34P28906 385 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 BEX3Q00994 111 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 KCNC3Q14003 757 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ATP6AP1Q15904 470 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 DESI1Q6ICB0 168 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 C1orf94Q6P1W5 598 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 RBM23Q86U06 439 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 SERPINA9Q86WD7 417 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 ELMOD3Q96FG2 381 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 KREMEN1Q96MU8 473 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 MROQ9BYG7 248 aa12.72□□□□□ -0.37
SRGAP3-201ENST00000360413 A0A1W2PQH9 124 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 CD8B2A6NJW9 211 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 UBFD1O14562 309 aaKnown RBP12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 STBD1O95210 358 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 CD8BP10966 210 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 MAOAP21397 527 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 SERPINF1P36955 418 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 PLA2G16P53816 162 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 PDGFRLQ15198 375 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 SVBPQ8N300 66 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 OR8K5Q8NH50 307 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 NSMAFQ92636 917 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 LRCH3Q96II8 777 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 OR2AG1Q9H205 316 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 ADAMTS6Q9UKP5 1117 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 PLEKHM1Q9Y4G2 1056 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 CDK5RAP2Q96SN8 1893 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 EEF1E1-BLOC1S5C9J1V9 151 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 FAM214AQ32MH5 1076 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 CFAP77Q6ZQR2 320 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 NPAS4Q8IUM7 802 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 OR5B17Q8NGF7 314 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 OR2T35Q8NGX2 323 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 ADAMTS18Q8TE60 1221 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 NELL2Q99435 816 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 VILLO15195 856 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 KLRK1P26718 216 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 ADRA1BP35368 520 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 TRIM23P36406 574 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 AQP2P41181 271 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 DGKGP49619 791 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 DSC2Q02487 901 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF440Q8IYI8 595 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 P2RX7Q99572 595 aaKnown RBP12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 RLIMQ9NVW2 624 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 PIP5K1CO60331 668 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 TACR2P21452 398 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 ETV1P50549 477 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 NDUFAF5Q5TEU4 345 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 VWA5B2Q8N398 1253 aa12.71□□□□□ -0.37
SRGAP3-201ENST00000360413 MT-CYBP00156 380 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms