RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SLC7A11Q9UPY5 501 aa15.41■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF705FA8MVS1 300 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 HCRTR2O43614 444 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 RASAL1O95294 804 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF705DP0CH99 300 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF705BP0CI00 300 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 HLA-EP13747 358 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 VSX2P58304 361 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 FAPQ12884 760 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 GRB7Q14451 532 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 TMEM107Q6UX40 140 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 THRSPQ92748 146 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 GPR22Q99680 433 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 DPH2Q9BQC3 489 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 DFNA5O60443 496 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 EPHA1P21709 976 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ADH6P28332 368 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 CD34P28906 385 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 GPR4P46093 362 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 DIO3P55073 304 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ZC3H14Q6PJT7 736 aaKnown RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 METTL25Q8N6Q8 603 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 OR9A1PQ8NGU1 263 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 REEP4Q9H6H4 257 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 WRAP73Q9P2S5 460 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 PRSS51A0A1B0GVH4 220 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 EVI2BP34910 448 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 AQP2P41181 271 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 HYAL4Q2M3T9 481 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 UGT2A3Q6UWM9 527 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 H7BY64 318 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ALDH3B1P43353 468 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 NTRK2Q16620 822 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ESX1Q8N693 406 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 TXNDC5Q8NBS9 432 aaKnown RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 OR4D6Q8NGJ1 314 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 WFIKKN2Q8TEU8 576 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 MMABQ96EY8 250 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 PGAM5Q96HS1 289 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 PRAP1Q96NZ9 151 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 UBE2J1Q9Y385 318 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-203ENST00000359759 CPNE6O95741 557 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ALDH3B2P48448 385 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF763Q0D2J5 394 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ADGRF1Q5T601 910 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 GSG1LQ6UXU4 331 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 OR2T33Q8NG76 320 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ZUFSPQ96AP4 578 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF599Q96NL3 588 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.4■□□□□ 0.063e-7■■■■□ 21.4
COL18A1-203ENST00000359759 ACTL8Q9H568 366 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 TMEM9Q9P0T7 183 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ACSL6Q9UKU0 697 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 DIP2CQ9Y2E4 1556 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 A8MVJ9 347 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 SHOXO15266 292 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 ADAP00813 363 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 CHRNA1P02708 482 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 PRKCAP17252 672 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 CTBP2P56545 445 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 FADDQ13158 208 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 HS3ST5Q8IZT8 346 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 NLGN4XQ8N0W4 816 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 CCDC106Q9BWC9 280 aa15.4■□□□□ 0.06
COL18A1-203ENST00000359759 BCL9O00512 1426 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 SPDEFO95238 335 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 RPS26P62854 115 aaKnown RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 SLC25A11Q02978 314 aaKnown RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 NFATC4Q14934 902 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 UBQLNLQ8IYU4 475 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 TRMT10AQ8TBZ6 339 aaKnown RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 WNT6Q9Y6F9 365 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 OAS1P00973 400 aaKnown RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 NOGQ13253 232 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 ASB15Q8WXK1 588 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 OR1F2PQ96R84 312 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 MRPS17Q9Y2R5 130 aaKnown RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 IGLV3-22A0A075B6J6 115 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 FEZF1A0PJY2 475 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 EOMESO95936 686 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 TMEM164Q5U3C3 297 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 FCRLBQ6BAA4 426 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 CCBE1Q6UXH8 406 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 CRTAC1Q9NQ79 661 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 NDUFAF4Q9P032 175 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 CENPBD1B2RD01 187 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 TSPAN15O95858 294 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 PGGT1BP53609 377 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF423Q2M1K9 1284 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 MEDAGQ5VYS4 303 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 ANKRD54Q6NXT1 300 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 SLC27A4Q6P1M0 643 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 OR2AP1Q8NGE2 309 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF420Q8TAQ5 688 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-203ENST00000359759 CLEC4DQ8WXI8 215 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 TMEM125Q96AQ2 219 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 PIP5K1AQ99755 562 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 MRIQ9BWK5 157 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF442Q9H7R0 627 aa15.39■□□□□ 0.05
COL18A1-203ENST00000359759 TMEM45AQ9NWC5 275 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms