RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 UTP15Q8TED0 518 aaKnown RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 GAB3Q8WWW8 586 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PATE1Q8WXA2 126 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PYURFQ96I23 114 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 TUBA1CQ9BQE3 449 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 CHID1Q9BWS9 393 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ADPRHL2Q9NX46 363 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SMPD3Q9NY59 655 aaPredicted RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 CEPT1Q9Y6K0 416 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ZNF780BQ9Y6R6 833 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 GOLGA4Q13439 2230 aaKnown RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 TP53BP1Q12888 1972 aaPredicted RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 A0A0J9YVX5 310 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 TRIM64A6NGJ6 449 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 RHPN2P1A8MT19 583 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 NOBOXO60393 691 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SOX30O94993 753 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 TDGF1P13385 188 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 NCK1P16333 377 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 CSNK2A2P19784 350 aaPredicted RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 KDELR2P33947 212 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 CAPGP40121 348 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 RPS6KA3P51812 740 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 EMP3P54852 163 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 BTN3A2P78410 334 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 GPLD1P80108 840 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 DCTN2Q13561 401 aaKnown RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 SPIDRQ14159 915 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 TCEA2Q15560 299 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SLC36A3Q495N2 470 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 TCTE1Q5JU00 501 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 GCNT6Q5T4J0 391 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 GARNL3Q5VVW2 1013 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ZNF793Q6ZN11 406 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PATL1Q86TB9 770 aaKnown RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 CBR4Q8N4T8 237 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ARL10Q8N8L6 244 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 TMEM105Q8N8V8 129 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SFXN5Q8TD22 340 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 ADAMTS18Q8TE60 1221 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 JPH3Q8WXH2 748 aaPredicted RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 TBC1D20Q96BZ9 403 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SDCCAG3Q96C92 435 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 AURKBQ96GD4 344 aaPredicted RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 BBS4Q96RK4 519 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SLC29A1Q99808 456 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 SORBS1Q9BX66 1292 aaKnown RBP12.59□□□□□ -0.39
NFIX-201ENST00000358552 TRIM8Q9BZR9 551 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 KLHL31Q9H511 634 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 PIF1Q9H611 641 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 FBXO4Q9UKT5 387 aa12.59□□□□□ -0.39
NFIX-201ENST00000358552 USP34Q70CQ2 3546 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 MYO1GB0I1T2 1018 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 H0YGG7 62 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 CLOCKO15516 846 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 DPM1O60762 260 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 NOL3O60936 208 aaKnown RBP12.58□□□□□ -0.4
NFIX-201ENST00000358552 OR6B1O95007 311 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 HPRP00739 348 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 ALPPL2P10696 532 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 ETS2P15036 469 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 PNLIPP16233 465 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 BCKDHBP21953 392 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 CRATP43155 626 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 CTSKP43235 329 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 ARF3P61204 181 aaPredicted RBP12.58□□□□□ -0.4
NFIX-201ENST00000358552 DMWDQ09019 674 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 GK3PQ14409 553 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 PMS2CLQ68D20 193 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 TMEM214Q6NUQ4 689 aaKnown RBP12.58□□□□□ -0.4
NFIX-201ENST00000358552 TSSK4Q6SA08 328 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 CCDC80Q76M96 950 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 ZZZ3Q8IYH5 903 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 C19orf47Q8N9M1 422 aaKnown RBP12.58□□□□□ -0.4
NFIX-201ENST00000358552 OR8K5Q8NH50 307 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 RASSF5Q8WWW0 418 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 NRBF2Q96F24 287 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 ELF4Q99607 663 aaPredicted RBP12.58□□□□□ -0.4
NFIX-201ENST00000358552 CHST8Q9H2A9 424 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 TMEM9Q9P0T7 183 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 DNAJB9Q9UBS3 223 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 BAG5Q9UL15 447 aa12.58□□□□□ -0.4
NFIX-201ENST00000358552 TNRC6BQ9UPQ9 1833 aaKnown RBP12.57□□□□□ -0.4
NFIX-201ENST00000358552 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 PPM1DO15297 605 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 CTSVO60911 334 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 TNFRSF21O75509 655 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 PDE9AO76083 593 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 NR2F6P10588 404 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 GLB1P16278 677 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 PPP2R1BP30154 601 aa12.57□□□□□ -0.4
NFIX-201ENST00000358552 MAPK10P53779 464 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms