RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 UCN3Q969E3 161 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 DCBLD2Q96PD2 775 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 CCT8L2Q96SF2 557 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 BRINP2Q9C0B6 783 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 SEMA3GQ9NS98 782 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 EHD3Q9NZN3 535 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 UTS2RQ9UKP6 389 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 MAPRE3Q9UPY8 281 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 SCAMP2O15127 329 aaKnown RBP14.32□□□□□ -0.12
TPM1-206ENST00000358278 RRP8O43159 456 aaKnown RBP14.32□□□□□ -0.12
TPM1-206ENST00000358278 FGF17O60258 216 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 CTNSO60931 367 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 ALOX12BO75342 701 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 ERAL1O75616 437 aaKnown RBP14.32□□□□□ -0.12
TPM1-206ENST00000358278 RECKO95980 971 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 UMODP07911 640 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 CYC1P08574 325 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 FURINP09958 794 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 C8orf89P0DMQ9 161 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 PCSK2P16519 638 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 DDX5P17844 614 aaKnown RBP14.32□□□□□ -0.12
TPM1-206ENST00000358278 CLDN8P56748 225 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 ID2Q02363 134 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 R3HCC1LQ7Z5L2 792 aaKnown RBP14.32□□□□□ -0.12
TPM1-206ENST00000358278 TICAM1Q8IUC6 712 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 TMEM151BQ8IW70 566 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 OR4N5Q8IXE1 308 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 KRTCAP2Q8N6L1 136 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 TSLPQ969D9 159 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 EXOSC8Q96B26 276 aaKnown RBP14.32□□□□□ -0.12
TPM1-206ENST00000358278 PPCDCQ96CD2 204 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 GIMAP4Q9NUV9 329 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 GPR45Q9Y5Y3 372 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 ACACBO00763 2458 aa14.32□□□□□ -0.12
TPM1-206ENST00000358278 WASHC1A8K0Z3 465 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 CREG1O75629 220 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 FAM107AO95990 144 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 IGHEP01854 428 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 COX7A2P14406 83 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 OTX2P32243 289 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 EFNA3P52797 238 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 CLNS1AP54105 237 aaKnown RBP14.31□□□□□ -0.12
TPM1-206ENST00000358278 SRSF6Q13247 344 aaKnown RBP14.31□□□□□ -0.12
TPM1-206ENST00000358278 PDCD4Q53EL6 469 aaKnown RBP14.31□□□□□ -0.12
TPM1-206ENST00000358278 METTL21CQ5VZV1 264 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 ANKRD26P1Q6NSI1 321 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 MIER2Q8N344 545 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 PLPP5Q8NEB5 264 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 OR4K14Q8NGD5 310 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 MTERF3Q96E29 417 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 SLC45A3Q96JT2 553 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 PRPF18Q99633 342 aaKnown RBP14.31□□□□□ -0.12
TPM1-206ENST00000358278 NECTIN3Q9NQS3 549 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 SH3BP4Q9P0V3 963 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 C19orf25Q9UFG5 118 aaPredicted RBP14.31□□□□□ -0.12
TPM1-206ENST00000358278 EXO1Q9UQ84 846 aaKnown RBP14.31□□□□□ -0.12
TPM1-206ENST00000358278 ENTPD4Q9Y227 616 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 ZNF780BQ9Y6R6 833 aa14.31□□□□□ -0.12
TPM1-206ENST00000358278 GPR75O95800 540 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 EIF2S3P41091 472 aaKnown RBP14.3□□□□□ -0.12
TPM1-206ENST00000358278 UFM1P61960 85 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 IL10RAQ13651 578 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 SQLEQ14534 574 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 SSPNQ14714 243 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 FAM180BQ6P0A1 224 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 LANCL3Q6ZV70 420 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 RAB43Q86YS6 212 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 OR7A2PQ8NGA2 310 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 ZCCHC14Q8WYQ9 949 aaKnown RBP14.3□□□□□ -0.12
TPM1-206ENST00000358278 ANKRD9Q96BM1 317 aaPredicted RBP14.3□□□□□ -0.12
TPM1-206ENST00000358278 CCNL2Q96S94 520 aaPredicted RBP14.3□□□□□ -0.12
TPM1-206ENST00000358278 ZBTB18Q99592 522 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 ALOXE3Q9BYJ1 711 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 SDR39U1Q9NRG7 319 aaPredicted RBP14.3□□□□□ -0.12
TPM1-206ENST00000358278 CES1P1Q9UKY3 287 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 COPG1Q9Y678 874 aaKnown RBP14.3□□□□□ -0.12
TPM1-206ENST00000358278 DOCK10Q96BY6 2186 aa14.3□□□□□ -0.12
TPM1-206ENST00000358278 IGKV3D-11A0A0A0MRZ8 115 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 MYOCOSA0A1B0GUC4 107 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 SYNDIG1LA6NDD5 238 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 TGFBR3LH3BV60 316 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 PCDH17O14917 1159 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 ANKRD28O15084 1053 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 IFNA16P05015 189 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 MMP11P24347 488 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 XKP51811 444 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 IRX1P78414 480 aaPredicted RBP14.29□□□□□ -0.12
TPM1-206ENST00000358278 PLIN5Q00G26 463 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 PDE7AQ13946 482 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 SERTAD2Q14140 314 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 UGT8Q16880 541 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 GKAP1Q5VSY0 366 aaPredicted RBP14.29□□□□□ -0.12
TPM1-206ENST00000358278 LRRC69Q6ZNQ3 347 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 RIMKLAQ8IXN7 391 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 SAMD14Q8IZD0 417 aaPredicted RBP14.29□□□□□ -0.12
TPM1-206ENST00000358278 ZNF764Q96H86 408 aaPredicted RBP14.29□□□□□ -0.12
TPM1-206ENST00000358278 BBS4Q96RK4 519 aa14.29□□□□□ -0.12
TPM1-206ENST00000358278 SLC35C2Q9NQQ7 365 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms