RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 AFF3P51826 1226 aaKnown RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 SLC35G1Q2M3R5 365 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 PSMG2Q969U7 264 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 AMBNQ9NP70 447 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 EMC3Q9P0I2 261 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 FZD4Q9ULV1 537 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 ASB3Q9Y575 518 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 MYO5BQ9ULV0 1848 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 AGAP5A6NIR3 686 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 A8MXE2 369 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SNAPC5O75971 98 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CNIH1O95406 144 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 TGM6O95932 706 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 S1PR1P21453 382 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 GTF2BQ00403 316 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 BCL2L15Q5TBC7 163 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 UNC93AQ86WB7 457 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PPTC7Q8NI37 304 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PIWIL2Q8TC59 973 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 CLEC4CQ8WTT0 213 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 C12orf43Q96C57 262 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 FUCA2Q9BTY2 467 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ST6GALNAC5Q9BVH7 336 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SEMA4CQ9C0C4 833 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 C2orf42Q9NWW7 574 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PSAT1Q9Y617 370 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 DUXAA6NLW8 204 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SEC14L6B5MCN3 397 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 F2P00734 622 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 LCATP04180 440 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 YES1P07947 543 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 HOXC6P09630 235 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 OR10J4P0C629 311 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 RPP30P78346 268 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 PON3Q15166 354 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 OVCH1Q7RTY7 1134 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CILP2Q8IUL8 1156 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 UBAC2Q8NBM4 344 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ZDHHC1Q8WTX9 485 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 OR5B2Q96R09 309 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CCM2Q9BSQ5 444 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ZMYM2Q9UBW7 1377 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 EDDM13A0A1B0GTR0 161 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 GXYLT2A0PJZ3 443 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CEBPZOSA8MTT3 80 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ENTPD6O75354 484 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 TUSC2O75896 110 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 KNG1P01042 644 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PNMTP11086 282 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 FCER1GP30273 86 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 DPP6P42658 865 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SLC15A1P46059 708 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CLCN2P51788 898 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PIGGQ5H8A4 983 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 TTLQ8NG68 377 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SNX18Q96RF0 628 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 HRASLSQ9HDD0 168 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ARHGEF28Q8N1W1 1705 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 A0A1W2PRV1 198 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 TULP2O00295 520 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ADAMDEC1O15204 470 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 RAD1O60671 282 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 GPR37L1O60883 481 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 OR2B3O76000 313 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SCAF4O95104 1147 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 PTGER4P35408 488 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CD97P48960 835 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ACSM3Q53FZ2 586 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 METTL2BQ6P1Q9 378 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 TMEM53Q6P2H8 277 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 GOT1L1Q8NHS2 421 aaPredicted RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 SECISBP2Q96T21 854 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 MAPKAP1Q9BPZ7 522 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 RARRES3Q9UL19 164 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PLEKHM1Q9Y4G2 1056 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 SALL3Q9BXA9 1300 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ANKRD30BLA7E2S9 258 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 C2orf74A8MZ97 194 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CD63P08962 238 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 CCR3P51677 355 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 TIGD5Q53EQ6 642 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 GALNT12Q8IXK2 581 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ZCCHC9Q8N567 271 aaKnown RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 SLC13A3Q8WWT9 602 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 FCAMRQ8WWV6 532 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ZNF223Q9UK11 482 aaPredicted RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 SAGE2PA6NJ88 616 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PLSCR1O15162 318 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 PI15O43692 258 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 TIMM8AO60220 97 aaPredicted RBP9.39□□□□□ -0.91
CHD3-202ENST00000358181 SLIT1O75093 1534 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 MTHFD2P13995 350 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 ZNF43P17038 809 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 HLA-FP30511 346 aa9.39□□□□□ -0.91
CHD3-202ENST00000358181 HOXD11P31277 338 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms