RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 ECHDC3Q96DC8 303 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 H3BN98 237 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 SDC2P34741 201 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 NUDT1P36639 197 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 PLK5Q496M5 336 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 DCST1Q5T197 706 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 TRIQKQ629K1 86 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 MED27Q6P2C8 311 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 ZNF730Q6ZMV8 503 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 C19orf18Q8NEA5 215 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 ATP6V1C2Q8NEY4 427 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 OR52I1Q8NGK6 324 aa22.57■■□□□ 1.2
NPAS3-203ENST00000357798 SPINT3P49223 89 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 OTOP2Q7RTS6 562 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 COMMD6Q7Z4G1 85 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 FAM26EQ8N5C1 309 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 OR56A3Q8NH54 315 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 UPF1Q92900 1129 aaKnown RBP eCLIP22.56■■□□□ 1.2
NPAS3-203ENST00000357798 VOPP1Q96AW1 172 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 SOSTQ9BQB4 213 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 KATNB1Q9BVA0 655 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 MYNNQ9NPC7 610 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 ING3Q9NXR8 418 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 CKBP12277 381 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 SOAT1P35610 550 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 STK19P49842 368 aaPredicted RBP22.56■■□□□ 1.2
NPAS3-203ENST00000357798 TAF1CQ15572 869 aaPredicted RBP22.56■■□□□ 1.2
NPAS3-203ENST00000357798 SLC25A30Q5SVS4 291 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 LAPTM4BQ86VI4 370 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 CCDC28AQ8IWP9 274 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 UBE2J2Q8N2K1 259 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 OR5H6Q8NGV6 325 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 CITED4Q96RK1 184 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 TMEM121BQ9BXQ6 578 aaPredicted RBP22.56■■□□□ 1.2
NPAS3-203ENST00000357798 POLR2J3Q9H1A7 115 aaKnown RBP22.56■■□□□ 1.2
NPAS3-203ENST00000357798 SYNDIG1Q9H7V2 258 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 PCDHGB7Q9Y5F8 929 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 PCM1Q15154 2024 aa22.56■■□□□ 1.2
NPAS3-203ENST00000357798 OR10H3O60404 316 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 SSTR4P31391 388 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 MC1RQ01726 317 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 C2orf80Q0P641 193 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 BTBD16Q32M84 506 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 FAM71E1Q6IPT2 247 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 METAP1DQ6UB28 335 aaPredicted RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 UNC5DQ6UXZ4 953 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 DPY19L3Q6ZPD9 716 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 C16orf78Q8WTQ4 265 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 BHMTQ93088 406 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 MTERF3Q96E29 417 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 TEFMQ96QE5 360 aaKnown RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 SPIN1Q9Y657 262 aaPredicted RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 C12orf71A8MTZ7 269 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 PRKAR1AP10644 381 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 SLC2A2P11168 524 aaPredicted RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 MAN2A2P49641 1150 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 CLDN20P56880 219 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 ATAT1Q5SQI0 421 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 BCDIN3DQ7Z5W3 292 aaKnown RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 POLDIP3Q9BY77 421 aaKnown RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 PPP1R3EQ9H7J1 279 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 ISYNA1Q9NPH2 558 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 TESQ9UGI8 421 aaKnown RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 CCDC88CQ9P219 2028 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 SGTAO43765 313 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 OR2B3O76000 313 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 FAM157BP0CG42 384 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 PTBP1P26599 531 aaKnown RBP eCLIP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 ETV5P41161 510 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 ETV1P50549 477 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 ALDH6A1Q02252 535 aaKnown RBP22.55■■□□□ 1.2
NPAS3-203ENST00000357798 PLD1Q13393 1074 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 FLYWCH1Q4VC44 716 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 C3orf38Q5JPI3 329 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 SLC8B1Q6J4K2 584 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 PGBD2Q6P3X8 592 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 SLCO4C1Q6ZQN7 724 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 QSOX2Q6ZRP7 698 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 PDXPQ96GD0 296 aa22.55■■□□□ 1.2
NPAS3-203ENST00000357798 A0A1W2PRB8 838 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 H1F0P07305 194 aaKnown RBP22.54■■□□□ 1.2
NPAS3-203ENST00000357798 PSKH1P11801 424 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 DDX5P17844 614 aaKnown RBP22.54■■□□□ 1.2
NPAS3-203ENST00000357798 C17orf99Q6UX52 265 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 ARMCX6Q7L4S7 300 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 C11orf74Q86VG3 221 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 TMEM203Q969S6 136 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 CASD1Q96PB1 797 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 SUV39H2Q9H5I1 410 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 SATB2Q9UPW6 733 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 PITPNM1O00562 1244 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 CATP04040 527 aaKnown RBP22.54■■□□□ 1.2
NPAS3-203ENST00000357798 APEX1P27695 318 aaKnown RBP22.54■■□□□ 1.2
NPAS3-203ENST00000357798 IMPA1P29218 277 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 WNT4P56705 351 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 SNRPD1P62314 119 aaKnown RBP22.54■■□□□ 1.2
NPAS3-203ENST00000357798 TPBGQ13641 420 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 TMEM163Q8TC26 289 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 HCSTQ9UBK5 93 aa22.54■■□□□ 1.2
NPAS3-203ENST00000357798 SF3B6Q9Y3B4 125 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms