RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 AGKQ53H12 422 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 SPANXN4Q5MJ08 99 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 MED25Q71SY5 747 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 ZNF595Q8IYB9 648 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 ANKS4BQ8N8V4 417 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 PPCDCQ96CD2 204 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 KLHL29Q96CT2 875 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 CNRIP1Q96F85 164 aaPredicted RBP23.84■■□□□ 1.41
SSBP3-202ENST00000357475 WDR54Q9H977 334 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 WDR41Q9HAD4 459 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 SH3BP4Q9P0V3 963 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 PTRH2Q9Y3E5 179 aaKnown RBP23.84■■□□□ 1.41
SSBP3-202ENST00000357475 MED19A0JLT2 244 aaPredicted RBP23.84■■□□□ 1.41
SSBP3-202ENST00000357475 ERAL1O75616 437 aaKnown RBP23.84■■□□□ 1.41
SSBP3-202ENST00000357475 UMODP07911 640 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 LIPCP11150 499 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 IL10P22301 178 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 PPP2R1BP30154 601 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 ACTN3Q08043 901 aaPredicted RBP23.84■■□□□ 1.41
SSBP3-202ENST00000357475 KLF10Q13118 480 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 DNASE1L3Q13609 305 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 PGS1Q32NB8 556 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 FAAH2Q6GMR7 532 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 GK5Q6ZS86 529 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 CCDC106Q9BWC9 280 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 SLAMF7Q9NQ25 335 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 C14orf105Q9NVL8 296 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 IL17BQ9UHF5 180 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 NCOR2Q9Y618 2525 aa23.84■■□□□ 1.41
SSBP3-202ENST00000357475 ZFHX4Q86UP3 3567 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 IDSB3KWA1 339 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 TLX3O43711 291 aaPredicted RBP23.83■■□□□ 1.41
SSBP3-202ENST00000357475 PRMT3O60678 531 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 CCDC22O60826 627 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 CTNSO60931 367 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 FAM174BQ3ZCQ3 159 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 QSOX2Q6ZRP7 698 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 VASH2Q86V25 355 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 TREML1Q86YW5 311 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 IL22RA1Q8N6P7 574 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 TANKQ92844 425 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 NAF1Q96HR8 494 aaKnown RBP23.83■■□□□ 1.41
SSBP3-202ENST00000357475 PTCHD1Q96NR3 888 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 WDR70Q9NW82 654 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 EHD3Q9NZN3 535 aa23.83■■□□□ 1.41
SSBP3-202ENST00000357475 MRPS33Q9Y291 106 aaKnown RBP23.83■■□□□ 1.41
SSBP3-202ENST00000357475 RAB40ALP0C0E4 278 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 PIK3R1P27986 724 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 FEN1P39748 380 aaKnown RBP23.82■■□□□ 1.4
SSBP3-202ENST00000357475 POLR2JP52435 117 aaKnown RBP23.82■■□□□ 1.4
SSBP3-202ENST00000357475 CPTPQ5TA50 214 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 OR4F3Q6IEY1 312 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 LANCL3Q6ZV70 420 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 FAM9CQ8IZT9 166 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 AMER2Q8N7J2 671 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 DOK4Q8TEW6 326 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 TESCQ96BS2 214 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 COQ8BQ96D53 544 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 ZNF681Q96N22 645 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 CRB3Q9BUF7 120 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 SLC35C2Q9NQQ7 365 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 PRDM9Q9NQV7 894 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 C3orf18Q9UK00 162 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 FARSAQ9Y285 508 aaKnown RBP23.82■■□□□ 1.4
SSBP3-202ENST00000357475 PCSK5Q92824 1860 aa23.82■■□□□ 1.4
SSBP3-202ENST00000357475 IGKV3D-11A0A0A0MRZ8 115 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 NR5A2O00482 541 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 CLDN4O14493 209 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 TBX19O60806 448 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 GPR75O95800 540 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 HEXBP07686 556 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 CLNS1AP54105 237 aaKnown RBP23.81■■□□□ 1.4
SSBP3-202ENST00000357475 WNT3P56703 355 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 HSD17B7P56937 341 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 CLN3Q13286 438 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 DGAT2L6Q6ZPD8 337 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 CAMKMTQ7Z624 323 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 OR4K14Q8NGD5 310 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 GATA6Q92908 595 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 VPS33AQ96AX1 596 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 MTERF3Q96E29 417 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 SLC52A3Q9NQ40 469 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 TAS2R7Q9NYW3 318 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 TCFL5Q9UL49 500 aa23.81■■□□□ 1.4
SSBP3-202ENST00000357475 FAM234BA2RU67 622 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 LIFP15018 202 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 CAPN3P20807 821 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 XKP51811 444 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 EMP2P54851 167 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 BLOC1S3Q6QNY0 202 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 R3HCC1LQ7Z5L2 792 aaKnown RBP23.8■■□□□ 1.4
SSBP3-202ENST00000357475 FITM2Q8N6M3 262 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 OR2Y1Q8NGV0 311 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 PPWD1Q96BP3 646 aaKnown RBP23.8■■□□□ 1.4
SSBP3-202ENST00000357475 ZBTB18Q99592 522 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 TMEM121BQ9BXQ6 578 aaPredicted RBP23.8■■□□□ 1.4
SSBP3-202ENST00000357475 ALOXE3Q9BYJ1 711 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 MMACHCQ9Y4U1 282 aa23.8■■□□□ 1.4
SSBP3-202ENST00000357475 ASPDHA6ND91 283 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 C21orf140B9A014 251 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms