RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ZFP90Q8TF47 636 aa14.71□□□□□ -0.05
CTSA-202ENST00000354880 MMABQ96EY8 250 aaPredicted RBP14.71□□□□□ -0.05
CTSA-202ENST00000354880 ZNF583Q96ND8 569 aa14.71□□□□□ -0.05
CTSA-202ENST00000354880 GLIPR2Q9H4G4 154 aa14.71□□□□□ -0.05
CTSA-202ENST00000354880 PIF1Q9H611 641 aa14.71□□□□□ -0.05
CTSA-202ENST00000354880 CLK4Q9HAZ1 481 aaKnown RBP14.71□□□□□ -0.05
CTSA-202ENST00000354880 ZNF780BQ9Y6R6 833 aa14.71□□□□□ -0.05
CTSA-202ENST00000354880 SEC16AO15027 2179 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 H0YIG0 161 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 CHST10O43529 356 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 BCAS2O75934 225 aaPredicted RBP14.71□□□□□ -0.06
CTSA-202ENST00000354880 LMNAP02545 664 aaKnown RBP14.71□□□□□ -0.06
CTSA-202ENST00000354880 CSNK2A2P19784 350 aaPredicted RBP14.71□□□□□ -0.06
CTSA-202ENST00000354880 PPIBP23284 216 aaKnown RBP14.71□□□□□ -0.06
CTSA-202ENST00000354880 NCBP2P52298 156 aaKnown RBP eCLIP14.71□□□□□ -0.06
CTSA-202ENST00000354880 TRAP1Q12931 704 aaKnown RBP14.71□□□□□ -0.06
CTSA-202ENST00000354880 BNIP2Q12982 314 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 HSPB3Q12988 150 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 RIPK1Q13546 671 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 CEBPEQ15744 281 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 SAMD14Q8IZD0 417 aaPredicted RBP14.71□□□□□ -0.06
CTSA-202ENST00000354880 SHISA5Q8N114 240 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 MVB12AQ96EY5 273 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 AMDHD1Q96NU7 426 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 SLC35A5Q9BS91 424 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 NDC1Q9BTX1 674 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 TRIM4Q9C037 500 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 IRF2BPLQ9H1B7 796 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 CXorf36Q9H7Y0 433 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 BCAP29Q9UHQ4 241 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 HCN4Q9Y3Q4 1203 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 GMEB1Q9Y692 573 aa14.71□□□□□ -0.06
CTSA-202ENST00000354880 ZNF749O43361 778 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 CBFA2T3O75081 653 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 NTRK1P04629 796 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 C8orf89P0DMQ9 161 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 RNH1P13489 461 aaKnown RBP14.7□□□□□ -0.06
CTSA-202ENST00000354880 HTR1EP28566 365 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 MPIP34949 423 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 SOAT1P35610 550 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 FEN1P39748 380 aaKnown RBP14.7□□□□□ -0.06
CTSA-202ENST00000354880 GCGRP47871 477 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 ARSFP54793 590 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 ABHD18Q0P651 414 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 TRA2AQ13595 282 aaKnown RBP eCLIP14.7□□□□□ -0.06
CTSA-202ENST00000354880 ZNF750Q32MQ0 723 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 AASDHQ4L235 1098 aaPredicted RBP14.7□□□□□ -0.06
CTSA-202ENST00000354880 YOD1Q5VVQ6 348 aaPredicted RBP14.7□□□□□ -0.06
CTSA-202ENST00000354880 FBXW10Q5XX13 1052 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 C10orf67Q8IYJ2 551 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 CLEC4FQ8N1N0 589 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 OR4K14Q8NGD5 310 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 PSMA8Q8TAA3 256 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 SUN3Q8TAQ9 357 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 FAM120BQ96EK7 910 aaKnown RBP14.7□□□□□ -0.06
CTSA-202ENST00000354880 ZNF681Q96N22 645 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 PARD6AQ9NPB6 346 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 FAM86C1Q9NVL1 165 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 HCN3Q9P1Z3 774 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 EGFL7Q9UHF1 273 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 CORO2BQ9UQ03 480 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 SNX8Q9Y5X2 465 aa14.7□□□□□ -0.06
CTSA-202ENST00000354880 EP300Q09472 2414 aaPredicted RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 C4orf47A7E2U8 309 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 FAM227AF5H4B4 570 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 STAMBPO95630 424 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 C1QCP02747 245 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 GPX2P18283 190 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 ALAS2P22557 587 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 UQCRC2P22695 453 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 NBL1P41271 181 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 ERFP50548 548 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 ZFP36L1Q07352 338 aaKnown RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 CCNIQ14094 377 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 PRAMEF17Q5VTA0 474 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 GPR155Q7Z3F1 870 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 PTRH1Q86Y79 214 aaKnown RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 CCDC116Q8IYX3 515 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 C10orf111Q8N326 155 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 METTL27Q8N6F8 245 aaPredicted RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 TMEM52Q8NDY8 209 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 HIPK4Q8NE63 616 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 OR2T12Q8NG77 320 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 OR5AK3PQ8NH89 298 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 PNPT1Q8TCS8 783 aaKnown RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 ADAMTS18Q8TE60 1221 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 JADE3Q92613 823 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 TANKQ92844 425 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 SIRT3Q9NTG7 399 aaPredicted RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 DHCR7Q9UBM7 475 aaKnown RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 NDOR1Q9UHB4 597 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 USP22Q9UPT9 525 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 TMEM184BQ9Y519 407 aaPredicted RBP14.69□□□□□ -0.06
CTSA-202ENST00000354880 MUC6Q6W4X9 2439 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 WDFY3Q8IZQ1 3526 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 A0A1W2PS29 197 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 CSTF2P33240 577 aaKnown RBP eCLIP14.69□□□□□ -0.06
CTSA-202ENST00000354880 GPC1P35052 558 aa14.69□□□□□ -0.06
CTSA-202ENST00000354880 CHI3L1P36222 383 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms