RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SLC28A2O43868 658 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 B4GALT2O60909 372 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 SRPRAP08240 638 aaKnown RBP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 LIMS1P48059 325 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 PIN1Q13526 163 aaPredicted RBP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 MLIPQ5VWP3 458 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 LACC1Q8IV20 430 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 MINDY2Q8NBR6 621 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 OR4D11Q8NGI4 311 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 OR2L2Q8NH16 312 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 TM4SF18Q96CE8 201 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 RSPRY1Q96DX4 576 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 ABHD8Q96I13 439 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 LGR4Q9BXB1 951 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 TPK1Q9H3S4 243 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 SEMA3GQ9NS98 782 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 ERVK13-1Q9NX77 482 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 PCDHGA3Q9Y5H0 932 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 KIAA1671Q9BY89 1806 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 LINC00854A0A1B0GVQ3 168 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 TMEM221A6NGB7 291 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 TLR4O00206 839 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 PAPLNO95428 1278 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 OPRD1P41143 372 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 UGT2B15P54855 530 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 LSM11P83369 360 aaKnown RBP eCLIP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 SYPL1Q16563 259 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 KHDRBS2Q5VWX1 349 aaKnown RBP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 REM2Q8IYK8 340 aaPredicted RBP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 C12orf76Q8N812 135 aaPredicted RBP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 FBXO15Q8NCQ5 510 aaPredicted RBP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 MAPKAP1Q9BPZ7 522 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 AHSPQ9NZD4 102 aa18.59■□□□□ 0.57
COL13A1-201ENST00000354547 CXXC1Q9P0U4 656 aaPredicted RBP18.59■□□□□ 0.57
COL13A1-201ENST00000354547 ZAR1LA6NP61 321 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 OR1F1O43749 312 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 OR12D1P0DN82 309 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 DDCP20711 480 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 DDX6P26196 483 aaKnown RBP eCLIP18.58■□□□□ 0.57
COL13A1-201ENST00000354547 PXNP49023 591 aaPredicted RBP18.58■□□□□ 0.57
COL13A1-201ENST00000354547 NKX2-5P52952 324 aaPredicted RBP18.58■□□□□ 0.57
COL13A1-201ENST00000354547 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.57
COL13A1-201ENST00000354547 DCST1Q5T197 706 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 C9orf64Q5T6V5 341 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 SPATC1Q76KD6 591 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 AMZ2Q86W34 360 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 OR8D1Q8WZ84 308 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 UBE2E3Q969T4 207 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 PAWRQ96IZ0 340 aaKnown RBP18.58■□□□□ 0.57
COL13A1-201ENST00000354547 OR52A5Q9H2C5 316 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 SEC14L3Q9UDX4 400 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 DOCK9Q9BZ29 2069 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 ALPK3Q96L96 1907 aa18.58■□□□□ 0.57
COL13A1-201ENST00000354547 CHD9Q3L8U1 2897 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 M0R3H8 397 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 TGM4P49221 684 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 MADCAM1Q13477 382 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 FBXO43Q4G163 708 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 PLAG1Q6DJT9 500 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 TCTN3Q6NUS6 607 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 PAQR6Q6TCH4 344 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 FAM129CQ86XR2 697 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 TCEANCQ8N8B7 351 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 PDXPQ96GD0 296 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 UCK2Q9BZX2 261 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 OSGEPL1Q9H4B0 414 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 EPHX3Q9H6B9 360 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 AP1M2Q9Y6Q5 423 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 EFCAB10A6NFE3 127 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 TMPRSS11DO60235 418 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 KCNK2O95069 426 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 APOL3O95236 402 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 GPC1P35052 558 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 HMGA2P52926 109 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 EPHA5P54756 1037 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 TCEA2Q15560 299 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 FAM46DQ8NEK8 389 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 CEP19Q96LK0 163 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 PSD2Q9BQI7 771 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 XKR8Q9H6D3 395 aa18.58■□□□□ 0.56
COL13A1-201ENST00000354547 USP34Q70CQ2 3546 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 ATG2BQ96BY7 2078 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 GPX5O75715 221 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 TIMP1P01033 207 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 KELP23276 732 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 PRMT2P55345 433 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 SSX1Q16384 188 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 DESI1Q6ICB0 168 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 GPR65Q8IYL9 337 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 MTERF3Q96E29 417 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 RAD9AQ99638 391 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 TVP23BQ9NYZ1 205 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 PRR23AA6NEV1 266 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 PSMD11O00231 422 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 SNPHO15079 494 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 SSX4O60224 188 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 MFN2O95140 757 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 MED26O95402 600 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 WASP42768 502 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 OLR1P78380 273 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms