RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 BEST4Q8NFU0 473 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 DNAJA3Q96EY1 480 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 SCRN2Q96FV2 425 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 C17orf62Q9BQA9 187 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 MAT2BQ9NZL9 334 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 MMP20O60882 483 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 PAX3P23760 479 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 MAPK8P45983 427 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 HNRNPFP52597 415 aaKnown RBP17.22■□□□□ 0.35
CTSB-202ENST00000353047 AP1S2P56377 157 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 PFN3P60673 137 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 CXCR4P61073 352 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 B4GALNT1Q00973 533 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 REPS1Q96D71 796 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 TEX12Q9BXU0 123 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 C11orf54Q9H0W9 315 aaPredicted RBP17.22■□□□□ 0.35
CTSB-202ENST00000353047 ZNF334Q9HCZ1 680 aaPredicted RBP17.22■□□□□ 0.35
CTSB-202ENST00000353047 ING3Q9NXR8 418 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 RPL36Q9Y3U8 105 aaKnown RBP17.22■□□□□ 0.35
CTSB-202ENST00000353047 PRR23D1E9PI22 279 aaPredicted RBP17.21■□□□□ 0.35
CTSB-202ENST00000353047 TEX46H3BTG2 121 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 SSNA1O43805 119 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 PRR23D2P0DMB1 279 aaPredicted RBP17.21■□□□□ 0.35
CTSB-202ENST00000353047 CYP2A6P11509 494 aaPredicted RBP17.21■□□□□ 0.35
CTSB-202ENST00000353047 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTSB-202ENST00000353047 MZT2BQ6NZ67 158 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 HCFC1R1Q9NWW0 138 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 SMAD9O15198 467 aaKnown RBP17.21■□□□□ 0.35
CTSB-202ENST00000353047 AKR7A2O43488 359 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 PEPDP12955 493 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 GPX2P18283 190 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 IDSP22304 550 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 PSMB5P28074 263 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 UQCRC1P31930 480 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 SLC3A1Q07837 685 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 SYPL1Q16563 259 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 SLC30A6Q6NXT4 461 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 C17orf64Q86WR6 236 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 CCDC116Q8IYX3 515 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 OR10H4Q8NGA5 316 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 OR51G2Q8NGK0 314 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 TRIM63Q969Q1 353 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 PDLIM5Q96HC4 596 aaKnown RBP17.21■□□□□ 0.35
CTSB-202ENST00000353047 CRELD1Q96HD1 420 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 TMEM39AQ9NV64 488 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 RNF186Q9NXI6 227 aa17.21■□□□□ 0.35
CTSB-202ENST00000353047 PCP4L1A6NKN8 68 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 CTGFP29279 349 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 HLA-FP30511 346 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 PCDH1Q08174 1060 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 FCRLBQ6BAA4 426 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 REEP3Q6NUK4 255 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 TESCQ96BS2 214 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 ZNF607Q96SK3 696 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 AHSPQ9NZD4 102 aa17.21■□□□□ 0.34
CTSB-202ENST00000353047 ZFR2Q9UPR6 939 aaKnown RBP17.21■□□□□ 0.34
CTSB-202ENST00000353047 MYOFQ9NZM1 2061 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 HPGDSO60760 199 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 F11P03951 625 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 RPL6Q02878 288 aaKnown RBP17.2■□□□□ 0.34
CTSB-202ENST00000353047 ZNF91Q05481 1191 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 LY6G5CQ5SRR4 150 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 LRIF1Q5T3J3 769 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.2■□□□□ 0.34
CTSB-202ENST00000353047 CLSTN3Q9BQT9 956 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 EGLN3Q9H6Z9 239 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 STMN3Q9NZ72 180 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 POP7O75817 140 aaKnown RBP17.2■□□□□ 0.34
CTSB-202ENST00000353047 CYBAP13498 195 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 ID2Q02363 134 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 KCNC4Q03721 635 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 MGAT3Q09327 533 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 FNDC3BQ53EP0 1204 aaKnown RBP17.2■□□□□ 0.34
CTSB-202ENST00000353047 ZNF367Q7RTV3 350 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 PDZD3Q86UT5 571 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 FAM129CQ86XR2 697 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 OXR1Q8N573 874 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 ZNF671Q8TAW3 534 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 TXNDC15Q96J42 360 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 ZNF717Q9BY31 904 aaPredicted RBP17.2■□□□□ 0.34
CTSB-202ENST00000353047 MCUBQ9NWR8 336 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 CCL26Q9Y258 94 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 ENPP4Q9Y6X5 453 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 NTN1O95631 604 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 JUNDP17535 347 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 GPR4P46093 362 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 HYAL4Q2M3T9 481 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 C16orf62Q7Z3J2 963 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 YIPF7Q8N8F6 280 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 KCT2Q8NC54 265 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 C16orf78Q8WTQ4 265 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 MRPL9Q9BYD2 267 aaKnown RBP17.2■□□□□ 0.34
CTSB-202ENST00000353047 OR2B2Q9GZK3 357 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 CDCP1Q9H5V8 836 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 DNMT3BQ9UBC3 853 aaKnown RBP17.2■□□□□ 0.34
CTSB-202ENST00000353047 ENOPH1Q9UHY7 261 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 HSPE1-MOB4S4R3N1 261 aa17.2■□□□□ 0.34
CTSB-202ENST00000353047 PDPK1O15530 556 aa17.19■□□□□ 0.34
CTSB-202ENST00000353047 RB1P06400 928 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms