RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SLC7A9P82251 487 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 ST3GAL3Q11203 375 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 DOCK1Q14185 1865 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 TBCEQ15813 527 aaPredicted RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 MANEALQ5VSG8 457 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 GRHL2Q6ISB3 625 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 ENPP7Q6UWV6 458 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 CARS2Q9HA77 564 aaKnown RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 GABARAPO95166 117 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 SERPINA3P01011 423 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 CD9P21926 228 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 CPN2P22792 545 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 TBPL1P62380 186 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 LRRC26Q2I0M4 334 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 BTBD16Q32M84 506 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 AGAP7PQ5VUJ5 663 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 CBARPQ8N350 705 aaPredicted RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 IRAK3Q9Y616 596 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 TAF1LQ8IZX4 1826 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 SLC19A2O60779 497 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 ADAP00813 363 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 CSNK2A2P19784 350 aaPredicted RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 DPY19L3Q6ZPD9 716 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 HTR3DQ70Z44 454 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 NRSN1Q8IZ57 195 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 SLC7A5P1Q8MH63 180 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 TOMM5Q8N4H5 51 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 GNPDA2Q8TDQ7 276 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 NR4A3Q92570 626 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 BEX2Q9BXY8 128 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 EIF3KQ9UBQ5 218 aaKnown RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 CD207Q9UJ71 328 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 TSPAN9O75954 239 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 RPS21P63220 83 aaKnown RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 GTF2IRD2BQ6EKJ0 949 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 DLEU7Q6UYE1 221 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 GTF2IRD2Q86UP8 949 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 PARP16Q8N5Y8 322 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 DPAGT1Q9H3H5 408 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 PLAGL1Q9UM63 463 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 SCML1Q9UN30 329 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 CLDN4O14493 209 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 SLC16A6O15403 523 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 NUDT14O95848 222 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 PIM1P11309 404 aaPredicted RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 ACTR1BP42025 376 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 MAP2K3P46734 347 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 ACTR1AP61163 376 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 BIKQ13323 160 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 ERMAPQ96PL5 475 aaPredicted RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 KLF16Q9BXK1 252 aaPredicted RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 TRIM36Q9NQ86 728 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 COMMD9Q9P000 198 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 IFT52Q9Y366 437 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 DUXAA6NLW8 204 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 PRAMEF12O95522 483 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 PCDH1Q08174 1060 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 CHMP1BQ7LBR1 199 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 SLITRK4Q8IW52 837 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 RPL3LQ92901 407 aaKnown RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 ZNF300Q96RE9 604 aaPredicted RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 HSPB11Q9Y547 144 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 ENPP4Q9Y6X5 453 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 CPSF4LA6NMK7 179 aaKnown RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 PEPDP12955 493 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 C21orf33P30042 268 aaPredicted RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 GNG2P59768 71 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 LIN54Q6MZP7 749 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 DHRS4L2Q6PKH6 230 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 FAM86B1Q8N7N1 296 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 B3GNT7Q8NFL0 401 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 RBM38Q9H0Z9 239 aaKnown RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 BRF2Q9HAW0 419 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 PFDN2Q9UHV9 154 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 MMP20O60882 483 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 RLN1P04808 185 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 NT5EP21589 574 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 STOMP27105 288 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 HOXD9P28356 352 aaPredicted RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 GMFBP60983 142 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 KCNJ8Q15842 424 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 LINGO2Q7L985 606 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 Q8N402 240 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 NMNAT1Q9HAN9 279 aaPredicted RBP14.09□□□□□ -0.15
NUP50-201ENST00000347635 PCDHGB1Q9Y5G3 927 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 AP1M2Q9Y6Q5 423 aa14.09□□□□□ -0.15
NUP50-201ENST00000347635 NPIPB15A6NHN6 443 aaPredicted RBP14.08□□□□□ -0.15
NUP50-201ENST00000347635 LEFTY1O75610 366 aa14.08□□□□□ -0.15
NUP50-201ENST00000347635 SPINT3P49223 89 aa14.08□□□□□ -0.15
NUP50-201ENST00000347635 BBS10Q8TAM1 723 aa14.08□□□□□ -0.15
NUP50-201ENST00000347635 AKAP1Q92667 903 aaKnown RBP eCLIP14.08□□□□□ -0.15
NUP50-201ENST00000347635 GLYATL1Q969I3 302 aa14.08□□□□□ -0.15
NUP50-201ENST00000347635 SCRN2Q96FV2 425 aa14.08□□□□□ -0.15
NUP50-201ENST00000347635 RNASET2O00584 256 aaKnown RBP14.08□□□□□ -0.16
NUP50-201ENST00000347635 TNFRSF10BO14763 440 aa14.08□□□□□ -0.16
NUP50-201ENST00000347635 CD1EP15812 388 aa14.08□□□□□ -0.16
NUP50-201ENST00000347635 PSMA3P25788 255 aa14.08□□□□□ -0.16
NUP50-201ENST00000347635 RGS6P49758 472 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms