RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DUSP2Q05923 314 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 SLC34A1Q06495 639 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 CCDC6Q16204 474 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 NDUFA9Q16795 377 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 AASDHQ4L235 1098 aaPredicted RBP10.36□□□□□ -0.75
ECM1-201ENST00000346569 ZC3H14Q6PJT7 736 aaKnown RBP10.36□□□□□ -0.75
ECM1-201ENST00000346569 SPATA24Q86W54 205 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 PTOV1Q86YD1 416 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 SPPL2CQ8IUH8 684 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 CCDC116Q8IYX3 515 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 CLEC4FQ8N1N0 589 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 CA13Q8N1Q1 262 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 TRIML2Q8N7C3 387 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 TNIP2Q8NFZ5 429 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 OR52N2Q8NGI0 321 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 NAT6Q93015 286 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 REXO5Q96IC2 774 aaKnown RBP10.36□□□□□ -0.75
ECM1-201ENST00000346569 DPH2Q9BQC3 489 aaPredicted RBP10.36□□□□□ -0.75
ECM1-201ENST00000346569 LRRN3Q9H3W5 708 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 RPF2Q9H7B2 306 aaKnown RBP10.36□□□□□ -0.75
ECM1-201ENST00000346569 PCDHGB2Q9Y5G2 931 aa10.36□□□□□ -0.75
ECM1-201ENST00000346569 LAMA1P25391 3075 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 HYKKA2RU49 373 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 NVLO15381 856 aaKnown RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 CHST10O43529 356 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 TNFRSF21O75509 655 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 ERAL1O75616 437 aaKnown RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 NSA2O95478 260 aaKnown RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 CPNE6O95741 557 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 NTRK1P04629 796 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 NR2F6P10588 404 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 UMPSP11172 480 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 BMP2P12643 396 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 FOLR1P15328 257 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 TLX1P31314 330 aaPredicted RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 PPM1FP49593 454 aaPredicted RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 SEPHS1P49903 392 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 CDK9P50750 372 aaKnown RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 DUSP3P51452 185 aaPredicted RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 VAC14Q08AM6 782 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 KCNAB1Q14722 419 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 VMACQ2NL98 169 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 ZNF750Q32MQ0 723 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 COX20Q5RI15 118 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 SAXO2Q658L1 398 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 NIPAL1Q6NVV3 410 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 ZZZ3Q8IYH5 903 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 PAPD5Q8NDF8 572 aaKnown RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 OR4D9Q8NGE8 314 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 OR5T3Q8NGG3 340 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 OR9A4Q8NGU2 314 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 CANT1Q8WVQ1 401 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 NEURL3Q96EH8 262 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 BBS4Q96RK4 519 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 CSF3RQ99062 836 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 DPYSL5Q9BPU6 564 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 SLC35A5Q9BS91 424 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 SPATA9Q9BWV2 254 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 GTPBP2Q9BX10 602 aaKnown RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 ASPSCR1Q9BZE9 553 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 ZNF768Q9H5H4 540 aaKnown RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 ANKHQ9HCJ1 492 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 NEUROD4Q9HD90 331 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 CCM2LQ9NUG4 571 aaPredicted RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 FAM86C1Q9NVL1 165 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 ARMC1Q9NVT9 282 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 SOHLH2Q9NX45 425 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 MAGEL2Q9UJ55 1249 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 ATXN7L1Q9ULK2 861 aaPredicted RBP10.35□□□□□ -0.75
ECM1-201ENST00000346569 CORO2BQ9UQ03 480 aa10.35□□□□□ -0.75
ECM1-201ENST00000346569 SPTBP11277 2137 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 A0A1W2PS29 197 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 ZNF860A6NHJ4 632 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 FAM227AF5H4B4 570 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 SGK494L7N484 410 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 CXCR6O00574 342 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 CREG1O75629 220 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 STAMBPO95630 424 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 KRT75O95678 551 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 CAPNS1P04632 268 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 ANKRD34CP0C6C1 535 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 C8orf89P0DMQ9 161 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 MPIP34949 423 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 SOX18P35713 384 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 SOX11P35716 441 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 FEN1P39748 380 aaKnown RBP10.34□□□□□ -0.75
ECM1-201ENST00000346569 NBL1P41271 181 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 CCT3P49368 545 aaKnown RBP10.34□□□□□ -0.75
ECM1-201ENST00000346569 RAB38P57729 211 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 OLR1P78380 273 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 FADDQ13158 208 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 VEZF1Q14119 521 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 GRM7Q14831 915 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 C16orf72Q14CZ0 275 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 CLPPQ16740 277 aaPredicted RBP10.34□□□□□ -0.75
ECM1-201ENST00000346569 FAM214AQ32MH5 1076 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 MTX3Q5HYI7 312 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 SNAP47Q5SQN1 464 aa10.34□□□□□ -0.75
ECM1-201ENST00000346569 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.34□□□□□ -0.75
ECM1-201ENST00000346569 TCEAL6Q6IPX3 200 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms