RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MTNR1AP48039 350 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 TLE2Q04725 743 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 DYRK1AQ13627 763 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 TOMM20Q15388 145 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF791Q3KP31 576 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SPRED1Q7Z699 444 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 PREX1Q8TCU6 1659 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SLC6A7Q99884 636 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 KCNIP3Q9Y2W7 256 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 PRAMEF2O60811 474 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 DDCP20711 480 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 MLLT6P55198 1093 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 FCGRTP55899 365 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 TBCEQ15813 527 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 CHRNA6Q15825 494 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 AKR1C8PQ5T2L2 129 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 FANK1Q8TC84 345 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 KCTD13Q8WZ19 329 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 RTP4Q96DX8 246 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 TMEM106CQ9BVX2 250 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SOHLH2Q9NX45 425 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 KLHL9Q9P2J3 617 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ANKRD26Q9UPS8 1709 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 HCRTO43612 131 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 CSNK2A2P19784 350 aaPredicted RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 EDNRBP24530 442 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 CERS1P27544 350 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ACVRL1P37023 503 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 THEM6Q8WUY1 208 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SLC5A11Q8WWX8 675 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ARHGAP39Q9C0H5 1083 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 OR51B5Q9H339 312 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 IGSF5Q9NSI5 407 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 HIF3AQ9Y2N7 669 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 ZCWPW2A0A1B0GU75 182 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 TSTD3H0UI37 97 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 BEST1O76090 585 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 RPS2P15880 293 aaKnown RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 OR2T33Q8NG76 320 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 PPTC7Q8NI37 304 aa11.62□□□□□ -0.55
COL12A1-202ENST00000345356 MRTO4Q9UKD2 239 aaKnown RBP11.62□□□□□ -0.55
COL12A1-202ENST00000345356 SMCO3A2RU48 225 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 C1QTNF3-AMACRE9PGA6 284 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 GRM6O15303 877 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 PRAF2O60831 178 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 TPPPO94811 219 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SNAPINO95295 136 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 CBSLP0DN79 551 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 IL4RP24394 825 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 CD34P28906 385 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 CBSP35520 551 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 DDOSTP39656 456 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 PTH2RP49190 550 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 WNT4P56705 351 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SLC8B1Q6J4K2 584 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF584Q8IVC4 421 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 OR9Q2Q8NGE9 314 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ACSL6Q9UKU0 697 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SARDHQ9UL12 918 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SMIM35A0A1B0GVV1 85 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 TBC1D3BA6NDS4 549 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 OR6C65A6NJZ3 312 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ARPC1BO15143 372 aaKnown RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 FABP7O15540 132 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 TNFRSF1BP20333 461 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 HOXD11P31277 338 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 GGT2P36268 569 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 MAGEA11P43364 429 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF763Q0D2J5 394 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 LRRC73Q5JTD7 316 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 DEFB128Q7Z7B8 93 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 TMPRSS12Q86WS5 348 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ZCCHC10Q8TBK6 192 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 RBPMSQ93062 196 aaKnown RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 NECAB3Q96P71 396 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ATG5Q9H1Y0 275 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 GSTO2Q9H4Y5 243 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 REEP4Q9H6H4 257 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 COPS3Q9UNS2 423 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 HS3ST4Q9Y661 456 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ZNF254O75437 659 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 IDUAP35475 653 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 FBXL22Q6P050 247 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ISCA2Q86U28 154 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 LACC1Q8IV20 430 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SVBPQ8N300 66 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 C12orf45Q8N5I9 185 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 ACBD7Q8N6N7 88 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 BEND7Q8N7W2 519 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 OR14K1Q8NGZ2 314 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 SLC22A17Q8WUG5 538 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 RIOK2Q9BVS4 552 aaKnown RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 QRSL1Q9H0R6 528 aaKnown RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 DCAF13Q9NV06 445 aaKnown RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 NLE1Q9NVX2 485 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-202ENST00000345356 FAM72CH0Y354 149 aa11.61□□□□□ -0.55
COL12A1-202ENST00000345356 MTX2O75431 263 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms