RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 REXO5Q96IC2 774 aaKnown RBP12.2□□□□□ -0.46
CLK3-201ENST00000345005 DHRS1Q96LJ7 313 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 PANX1Q96RD7 426 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 F2RL3Q96RI0 385 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 DPH7Q9BTV6 452 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 COL25A1Q9BXS0 654 aaPredicted RBP12.2□□□□□ -0.46
CLK3-201ENST00000345005 BHLHE41Q9C0J9 482 aaPredicted RBP12.2□□□□□ -0.46
CLK3-201ENST00000345005 PIF1Q9H611 641 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 SOX17Q9H6I2 414 aaPredicted RBP12.2□□□□□ -0.46
CLK3-201ENST00000345005 SPHK1Q9NYA1 384 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 TAAR2Q9P1P5 351 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 UGT2A1Q9Y4X1 527 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 A3GALT2U3KPV4 340 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 EML5Q05BV3 1969 aa12.2□□□□□ -0.46
CLK3-201ENST00000345005 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 EVPLLA8MZ36 301 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 FAM220BPB1ANY3 271 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 CXCR6O00574 342 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 AQP9O43315 295 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 LCMT2O60294 686 aaKnown RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 TBX6O95947 436 aaPredicted RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 VIPP01282 170 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 GSTT2P0CG29 244 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 GSTT2BP0CG30 244 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 HOXB9P17482 250 aaPredicted RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 PEBP1P30086 187 aaKnown RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 AHRP35869 848 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 ARPC4P59998 168 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 CYP4F2P78329 520 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 CDK5R2Q13319 367 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 KIR2DS3Q14952 304 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 MEP1AQ16819 746 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 PRRT3Q5FWE3 981 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 FAM71E1Q6IPT2 247 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 DNAJC14Q6Y2X3 702 aaPredicted RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 PLEKHG7Q6ZR37 379 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 TAF8Q7Z7C8 310 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 MICU2Q8IYU8 434 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 ADGRF3Q8IZF5 1079 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 ZNF548Q8NEK5 533 aaPredicted RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 OR6Q1Q8NGQ2 317 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 OR10A6Q8NH74 314 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 FIG4Q92562 907 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 FCGR1BQ92637 280 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 CPPED1Q9BRF8 314 aaPredicted RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 SARGQ9BW04 601 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 GABARAPL1Q9H0R8 117 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 KAT8Q9H7Z6 458 aaKnown RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 MOV10Q9HCE1 1003 aaKnown RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 SLC6A13Q9NSD5 602 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 DCAF13Q9NV06 445 aaKnown RBP12.19□□□□□ -0.46
CLK3-201ENST00000345005 SH3BP4Q9P0V3 963 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 ANKMY1Q9P2S6 941 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 KLF15Q9UIH9 416 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 ADAM29Q9UKF5 820 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 INVSQ9Y283 1065 aa12.19□□□□□ -0.46
CLK3-201ENST00000345005 TAF4O00268 1085 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 RNASET2O00584 256 aaKnown RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 PLPP1O14494 284 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 BCKDKO14874 412 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 CAPN5O15484 640 aaPredicted RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 NDUFS4O43181 175 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 B4GAT1O43505 415 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 CPSF4O95639 269 aaKnown RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 GBAP04062 536 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 GSNP06396 782 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 IDUAP35475 653 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 BSGP35613 385 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 GSTM5P46439 218 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 PPP5CP53041 499 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 TAS2R50P59544 299 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 FADDQ13158 208 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 TMEM35AQ53FP2 167 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 SHQ1Q6PI26 577 aaKnown RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 P2RY8Q86VZ1 359 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 PARGQ86W56 976 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 CREB3L4Q8TEY5 395 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 SLC6A18Q96N87 628 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 TCEAL2Q9H3H9 227 aaPredicted RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 DUSP21Q9H596 190 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 POT1Q9NUX5 634 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 PAK1IP1Q9NWT1 392 aaPredicted RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 CPNE7Q9UBL6 633 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 SPASTQ9UBP0 616 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 EXO1Q9UQ84 846 aaKnown RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 BTBD3Q9Y2F9 522 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 PCDHGA2Q9Y5H1 932 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 AP1M2Q9Y6Q5 423 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 KNL1Q8NG31 2342 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 TP53BP1Q12888 1972 aaPredicted RBP12.18□□□□□ -0.46
CLK3-201ENST00000345005 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 HS6ST1O60243 411 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 KLHL18O94889 574 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 EPN2O95208 641 aa12.18□□□□□ -0.46
CLK3-201ENST00000345005 NADKO95544 446 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms