RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 SPACA6W5XKT8 324 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 ITPR2Q14571 2701 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 CSMD1Q96PZ7 3565 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 NOTCH2Q04721 2471 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 CACNA1DQ01668 2161 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 A0A1W2PR48 441 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 C17orf105B2RV13 164 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 PROM1O43490 865 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 NME2P1O60361 137 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 DLX3O60479 287 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 ITGA10O75578 1167 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 SHBGP04278 402 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 NME2P22392 152 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 PHEXP78562 749 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 FOLH1Q04609 750 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 SERTAD2Q14140 314 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 GGTA1PQ4G0N0 100 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 TEX35Q5T0J7 233 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 MILR1Q7Z6M3 343 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.41□□□□□ -0.26
HMGN3-202ENST00000344726 TMEM178AQ8NBL3 297 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 MORN4Q8NDC4 146 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 OR14A16Q8NHC5 309 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 SLC2A12Q8TD20 617 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 DAZLQ92904 295 aaKnown RBP13.41□□□□□ -0.26
HMGN3-202ENST00000344726 PPWD1Q96BP3 646 aaKnown RBP13.41□□□□□ -0.26
HMGN3-202ENST00000344726 HS3ST6Q96QI5 342 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 CENPKQ9BS16 269 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 OR8D2Q9GZM6 311 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 RPF2Q9H7B2 306 aaKnown RBP13.41□□□□□ -0.26
HMGN3-202ENST00000344726 FARSBQ9NSD9 589 aaKnown RBP13.41□□□□□ -0.26
HMGN3-202ENST00000344726 MS4A12Q9NXJ0 267 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 NINQ8N4C6 2090 aa13.41□□□□□ -0.26
HMGN3-202ENST00000344726 NCOA6Q14686 2063 aaPredicted RBP13.4□□□□□ -0.26
HMGN3-202ENST00000344726 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 A0A1W2PPM1 405 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 SYNDIG1LA6NDD5 238 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 GLOD5A6NK44 160 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 HRKO00198 91 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 CDK2AP1O14519 115 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 FCHO1O14526 889 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 ZNF354AO60765 605 aaPredicted RBP13.4□□□□□ -0.26
HMGN3-202ENST00000344726 ZFAND5O76080 213 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 FAM58BPP0C7Q3 252 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 TNNI3P19429 210 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 HSD17B3P37058 310 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 STT3AP46977 705 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 HSF1Q00613 529 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 MAPKAPK3Q16644 382 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 UNC50Q53HI1 259 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 ZNF678Q5SXM1 525 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 SH2D5Q6ZV89 423 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 MDGA2Q7Z553 956 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 NUDT13Q86X67 352 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 CHERPQ8IWX8 916 aaKnown RBP13.4□□□□□ -0.26
HMGN3-202ENST00000344726 CPSF7Q8N684 471 aaKnown RBP13.4□□□□□ -0.26
HMGN3-202ENST00000344726 HORMAD2Q8N7B1 307 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 EIF1ADQ8N9N8 165 aaKnown RBP13.4□□□□□ -0.26
HMGN3-202ENST00000344726 TRPC4APQ8TEL6 797 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 DOK4Q8TEW6 326 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 ZNF721Q8TF20 911 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 GPR137Q96N19 417 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 TMEM237Q96Q45 408 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 SERPINI1Q99574 410 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 CCDC77Q9BR77 488 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 MRPL1Q9BYD6 325 aaKnown RBP13.4□□□□□ -0.26
HMGN3-202ENST00000344726 LYARQ9NX58 379 aaKnown RBP13.4□□□□□ -0.26
HMGN3-202ENST00000344726 PHF11Q9UIL8 331 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 SH3BGRL2Q9UJC5 107 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 FREM3P0C091 2139 aa13.4□□□□□ -0.26
HMGN3-202ENST00000344726 EXPH5Q8NEV8 1989 aa13.4□□□□□ -0.27
HMGN3-202ENST00000344726 TRGV8A0A0C4DH27 118 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 A0A1B0GUH1 482 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 A0A1W2PS29 197 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 NPIPA5E9PKD4 350 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 WWP2O00308 870 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 OR2J2O76002 312 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 OR4F21O95013 312 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 SEMA3DO95025 777 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 AIFM1O95831 613 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 OTCP00480 354 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 PDYNP01213 254 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 CA7P43166 264 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 SSR4P51571 173 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 HK2P52789 917 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 HERVK_113P63132 956 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 CLCQ05315 142 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 SGO1Q5FBB7 561 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 TCHHL1Q5QJ38 904 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-202ENST00000344726 TTC19Q6DKK2 380 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-202ENST00000344726 CYP20A1Q6UW02 462 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 HSDL2Q6YN16 418 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 LCA5Q86VQ0 697 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 CYP4Z2PQ8N1L4 340 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 TMEM156Q8N614 296 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
HMGN3-202ENST00000344726 ITLN2Q8WWU7 325 aaPredicted RBP13.39□□□□□ -0.27
HMGN3-202ENST00000344726 TANKQ92844 425 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms