RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 RPL38P63173 70 aaKnown RBP17.59■□□□□ 0.41
CDHR4-201ENST00000343366 OLR1P78380 273 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 SERTAD2Q14140 314 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 UGT8Q16880 541 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 MINDY4Q4G0A6 757 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 C6orf136Q5SQH8 315 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 MFSD4BQ5TF39 518 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 OGFOD2Q6N063 350 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 FAM47EQ6ZV65 393 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 ACAD11Q709F0 780 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 SAMD14Q8IZD0 417 aaPredicted RBP17.59■□□□□ 0.41
CDHR4-201ENST00000343366 FNDC5Q8NAU1 212 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 CEP70Q8NHQ1 597 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 ACTRT2Q8TDY3 377 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 THAP4Q8WY91 577 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 RNF31Q96EP0 1072 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 MAELQ96JY0 434 aaKnown RBP17.59■□□□□ 0.41
CDHR4-201ENST00000343366 SORBS1Q9BX66 1292 aaKnown RBP17.59■□□□□ 0.41
CDHR4-201ENST00000343366 TRIM55Q9BYV6 548 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 LANCL2Q9NS86 450 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 ASIC5Q9NY37 505 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 FAM53CQ9NYF3 392 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 C3orf18Q9UK00 162 aa17.59■□□□□ 0.41
CDHR4-201ENST00000343366 VIMP08670 466 aaKnown RBP17.58■□□□□ 0.4
CDHR4-201ENST00000343366 PRR35P0CG20 571 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 HNRNPH2P55795 449 aaKnown RBP17.58■□□□□ 0.4
CDHR4-201ENST00000343366 RAE1P78406 368 aaKnown RBP17.58■□□□□ 0.4
CDHR4-201ENST00000343366 RFTN2Q52LD8 501 aaPredicted RBP17.58■□□□□ 0.4
CDHR4-201ENST00000343366 NDUFAF5Q5TEU4 345 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 OR52E8Q6IFG1 317 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 LARP4Q71RC2 724 aaKnown RBP eCLIP17.58■□□□□ 0.4
CDHR4-201ENST00000343366 SPATA19Q7Z5L4 167 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 TMEM132CQ8N3T6 1108 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 MIB2Q96AX9 1013 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 TM4SF18Q96CE8 201 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 C3orf30Q96M34 536 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 CATSPER2Q96P56 530 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 VN1R1Q9GZP7 353 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 SOX17Q9H6I2 414 aaPredicted RBP17.58■□□□□ 0.4
CDHR4-201ENST00000343366 AKTIPQ9H8T0 292 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 MYNNQ9NPC7 610 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 PRTFDC1Q9NRG1 225 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 EHD3Q9NZN3 535 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 ATG4BQ9Y4P1 393 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 PTGDR2Q9Y5Y4 395 aa17.58■□□□□ 0.4
CDHR4-201ENST00000343366 CCDC88CQ9P219 2028 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 ATP6AP2A0A1C7CYW4 349 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 CNOT3O75175 753 aaKnown RBP17.57■□□□□ 0.4
CDHR4-201ENST00000343366 ALOX12BO75342 701 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 ATP6AP2O75787 350 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 GBAP04062 536 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 C8orf89P0DMQ9 161 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 F8A1P23610 371 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 AP2B1P63010 937 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 SLC13A2Q13183 592 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 C4orf17Q53FE4 359 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 EPGNQ6UW88 154 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 FAM47BQ8NA70 645 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 C16orf78Q8WTQ4 265 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 ZNF764Q96H86 408 aaPredicted RBP17.57■□□□□ 0.4
CDHR4-201ENST00000343366 PELOQ9BRX2 385 aaKnown RBP17.57■□□□□ 0.4
CDHR4-201ENST00000343366 MRGBPQ9NV56 204 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 PCDHA9Q9Y5H5 950 aa17.57■□□□□ 0.4
CDHR4-201ENST00000343366 PRRC2CQ9Y520 2896 aaKnown RBP17.56■□□□□ 0.4
CDHR4-201ENST00000343366 A0A1W2PQ72 361 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 A0A1W2PR48 441 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 PEX12O00623 359 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 SDHDO14521 159 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 B4GALT2O60909 372 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 UMODP07911 640 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 TAS2R50P59544 299 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 RHAGQ02094 409 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 STX4Q12846 297 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 NSDHLQ15738 373 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 TMEM205Q6UW68 189 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 R3HCC1LQ7Z5L2 792 aaKnown RBP17.56■□□□□ 0.4
CDHR4-201ENST00000343366 SCUBE1Q8IWY4 988 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 NATD1Q8N6N6 113 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 MTERF3Q96E29 417 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 CHMP6Q96FZ7 201 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 PTCHD1Q96NR3 888 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 CCDC28BQ9BUN5 200 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 DLGAP4Q9Y2H0 992 aa17.56■□□□□ 0.4
CDHR4-201ENST00000343366 POLR3HQ9Y535 204 aaPredicted RBP17.56■□□□□ 0.4
CDHR4-201ENST00000343366 ANKRD17O75179 2603 aaKnown RBP17.55■□□□□ 0.4
CDHR4-201ENST00000343366 RP1L1Q8IWN7 2480 aaPredicted RBP17.55■□□□□ 0.4
CDHR4-201ENST00000343366 LOC102723996A0A087X1L8 192 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 ZNF195O14628 629 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 POLR3GO15318 223 aaPredicted RBP17.55■□□□□ 0.4
CDHR4-201ENST00000343366 DIAPH2O60879 1101 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 DNAJB6O75190 326 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 AIFM1O95831 613 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 JUNP05412 331 aaKnown RBP17.55■□□□□ 0.4
CDHR4-201ENST00000343366 ATXN8OSP0DMR3 200 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 BCKDHAP12694 445 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 DDCP20711 480 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 PIK3R1P27986 724 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 RRADP55042 308 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 IL23RQ5VWK5 629 aa17.55■□□□□ 0.4
CDHR4-201ENST00000343366 LAPTM4BQ86VI4 370 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms