RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 HEPACAMQ14CZ8 416 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 P2RY14Q15391 338 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 LEXMQ3ZCV2 418 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 KLHL22Q53GT1 634 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 RNF219Q5W0B1 726 aaPredicted RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 GRHL2Q6ISB3 625 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 TMEM65Q6PI78 240 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 USP30Q70CQ3 517 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 BMP8AQ7Z5Y6 402 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 PLEKHH3Q7Z736 793 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 LAPTM4BQ86VI4 370 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 GPALPP1Q8IXQ4 340 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 KLHDC8AQ8IYD2 350 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SYT14Q8NB59 555 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ATAD1Q8NBU5 361 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SLC37A3Q8NCC5 494 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF680Q8NEM1 530 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 CDC26Q8NHZ8 85 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SLC35A5Q9BS91 424 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 FUZQ9BT04 418 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 POLDIP3Q9BY77 421 aaKnown RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 LIN7BQ9HAP6 207 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 EMC7Q9NPA0 242 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ZFP64Q9NPA5 681 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ANGPT4Q9Y264 503 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 Q9Y3F1 56 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SCN10AQ9Y5Y9 1956 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 IGLV3-16A0A075B6K0 115 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SNTNA6NMZ2 147 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 FAM227AF5H4B4 570 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 FAAHO00519 579 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SLC30A4O14863 429 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ETHE1O95571 254 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 RAF1P04049 648 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 TP53P04637 393 aaPredicted RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ANXA4P09525 319 aaPredicted RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 CTSHP09668 335 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 LHCGRP22888 699 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ITPKAP23677 461 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SLC6A1P30531 599 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 TIA1P31483 386 aaKnown RBP eCLIP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 GABRA5P31644 462 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 FEN1P39748 380 aaKnown RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ETV5P41161 510 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ETV1P50549 477 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 PTPN5P54829 565 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 HBA1P69905 142 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 B4GALNT1Q00973 533 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 DSC1Q08554 894 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 BAMBIQ13145 260 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 PDE7AQ13946 482 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SPIN4Q56A73 249 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ATAT1Q5SQI0 421 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 TRIM40Q6P9F5 258 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 LINGO4Q6UY18 593 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 KCTD20Q7Z5Y7 419 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 GPR65Q8IYL9 337 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 TAGAPQ8N103 731 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 TM9SF4Q92544 642 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ATF6BQ99941 703 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 AIFM2Q9BRQ8 373 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 FGF20Q9NP95 211 aaPredicted RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ADARB2Q9NS39 739 aaKnown RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 ZDHHC3Q9NYG2 299 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 YARS2Q9Y2Z4 477 aaKnown RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 SPIN1Q9Y657 262 aaPredicted RBP9.21□□□□□ -0.94
HOXA1-201ENST00000343060 KCNE2Q9Y6J6 123 aa9.21□□□□□ -0.94
HOXA1-201ENST00000343060 TRDV1A0A1B0GX56 115 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CACNB4O00305 520 aaPredicted RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 FABP7O15540 132 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 HIST1H2AGP0C0S8 130 aaPredicted RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 HIST1H2ADP20671 130 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CFL1P23528 166 aaKnown RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 ELAVL4P26378 380 aaKnown RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 PTGS2P35354 604 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 GSTM5P46439 218 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 XKP51811 444 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 LIM2P55344 173 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 RHOAP61586 193 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 POU6F2P78424 691 aaPredicted RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 EFNB1P98172 346 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 IRF8Q02556 426 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 KCNC3Q14003 757 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 PUM1Q14671 1186 aaKnown RBP eCLIP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 SEC23BQ15437 767 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 COL28A1Q2UY09 1125 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 PLA1AQ53H76 456 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 BICRALQ6AI39 1079 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CASP12Q6UXS9 341 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 TMIGD1Q6UXZ0 262 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 TPGS1Q6ZTW0 290 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 ANKS3Q6ZW76 656 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CCDC120Q96HB5 630 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 HIST1H2AHQ96KK5 128 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 HIST1H2AJQ99878 128 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 H2AFJQ9BTM1 129 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 ACAT2Q9BWD1 397 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 RANBP3Q9H6Z4 567 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms