RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 HTRA3P83110 453 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 MEF2AQ02078 507 aaPredicted RBP21.3■■□□□ 1
TRIM28-202ENST00000341753 C2orf80Q0P641 193 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 TATDN3Q17R31 274 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 ATAT1Q5SQI0 421 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 XKRXQ6PP77 449 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 ZNF783Q6ZMS7 281 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.3■■□□□ 18e-7■□□□□ 11.1
TRIM28-202ENST00000341753 ZNF557Q8N988 423 aaPredicted RBP21.3■■□□□ 1
TRIM28-202ENST00000341753 OR51B5Q9H339 312 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 TVP23BQ9NYZ1 205 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 STOX2Q9P2F5 926 aaPredicted RBP21.3■■□□□ 1
TRIM28-202ENST00000341753 RFXAPO00287 272 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 SEMA7AO75326 666 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 CRYZL1O95825 349 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 SLC16A8O95907 504 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 IGSF6O95976 241 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 ALPPP05187 535 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 MAN2A2P49641 1150 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 FCHO2Q0JRZ9 810 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 FAPQ12884 760 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 CASP12Q6UXS9 341 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 CEACAM20Q6UY09 585 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 CAMKMTQ7Z624 323 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 HOMEZQ8IX15 550 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 SLAIN1Q8ND83 568 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 RASSF5Q8WWW0 418 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 MYLIPQ8WY64 445 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 TRIM63Q969Q1 353 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 RSPO3Q9BXY4 272 aaPredicted RBP21.3■■□□□ 1
TRIM28-202ENST00000341753 GPBP1L1Q9HC44 474 aaPredicted RBP21.3■■□□□ 1
TRIM28-202ENST00000341753 COMMD3Q9UBI1 195 aa21.3■■□□□ 1
TRIM28-202ENST00000341753 SPIN1Q9Y657 262 aaPredicted RBP21.3■■□□□ 1
TRIM28-202ENST00000341753 HEPACAM2A8MVW5 462 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 H0YIV9 168 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 SOCS5O75159 536 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 ZNF780AO75290 641 aaPredicted RBP21.29■■□□□ 1
TRIM28-202ENST00000341753 ENDOUP21128 410 aaKnown RBP21.29■■□□□ 1
TRIM28-202ENST00000341753 CD70P32970 193 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 ALDH9A1P49189 494 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 OR2G6Q5TZ20 316 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 TRIM40Q6P9F5 258 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 ARMCX6Q7L4S7 300 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 COMMD6Q7Z4G1 85 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 NEIL2Q969S2 332 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 PPCDCQ96CD2 204 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 SCRN2Q96FV2 425 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 TM9SF2Q99805 663 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 WFDC6Q9BQY6 131 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 FZD3Q9NPG1 666 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 MYOFQ9NZM1 2061 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 C12orf71A8MTZ7 269 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 MEN1O00255 615 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 TLX2O43763 284 aaPredicted RBP21.29■■□□□ 1
TRIM28-202ENST00000341753 OSMP13725 252 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 ETV5P41161 510 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 MLLT3P42568 568 aaPredicted RBP21.29■■□□□ 1
TRIM28-202ENST00000341753 ETV1P50549 477 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 XKP51811 444 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 DEFB103AP81534 67 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 SP140Q13342 867 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 MPPE1Q53F39 396 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 CRB2Q5IJ48 1285 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 TNFAIP8L2Q6P589 184 aaPredicted RBP21.29■■□□□ 1
TRIM28-202ENST00000341753 DEF8Q6ZN54 512 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 C11orf74Q86VG3 221 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 OXR1Q8N573 874 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 ZFP41Q8N8Y5 198 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 OR5H6Q8NGV6 325 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 SUN5Q8TC36 379 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 GFM1Q96RP9 751 aaKnown RBP21.29■■□□□ 1
TRIM28-202ENST00000341753 ZDHHC6Q9H6R6 413 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 RC3H2Q9HBD1 1191 aaKnown RBP21.29■■□□□ 1
TRIM28-202ENST00000341753 SH2B3Q9UQQ2 575 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 INSL5Q9Y5Q6 135 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 ALG5Q9Y673 324 aa21.29■■□□□ 1
TRIM28-202ENST00000341753 IGLV3-16A0A075B6K0 115 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 A8MVJ9 347 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 CKMP06732 381 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 ITGB7P26010 798 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 IL12RB1P42701 662 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 RPS25P62851 125 aaKnown RBP21.28■■□□□ 1
TRIM28-202ENST00000341753 TLE2Q04725 743 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 VWCEQ96DN2 955 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 C1GALT1C1Q96EU7 318 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 BHLHE41Q9C0J9 482 aaPredicted RBP21.28■■□□□ 1
TRIM28-202ENST00000341753 KLHL42Q9P2K6 505 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 PLXNB3Q9ULL4 1909 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 POLR1CO15160 346 aaPredicted RBP21.28■■□□□ 1
TRIM28-202ENST00000341753 PCSK2P16519 638 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 GABRR2P28476 465 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 RAB25P57735 213 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 TAS2R50P59544 299 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 ZNF763Q0D2J5 394 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 LMAN2Q12907 356 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 C1DQ13901 141 aaKnown RBP21.28■■□□□ 1
TRIM28-202ENST00000341753 GPR19Q15760 415 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 BTBD16Q32M84 506 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 SPIN4Q56A73 249 aa21.28■■□□□ 1
TRIM28-202ENST00000341753 PLET1Q6UQ28 207 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms