RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 A8MUI8 341 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 SNNO75324 88 aaPredicted RBP12.37□□□□□ -0.43
TUBD1-202ENST00000340993 RSL1D1O76021 490 aaKnown RBP12.37□□□□□ -0.43
TUBD1-202ENST00000340993 FGF4P08620 206 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 IL10P22301 178 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 TSFMP43897 325 aaKnown RBP12.37□□□□□ -0.43
TUBD1-202ENST00000340993 SLC18A1P54219 525 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 C2orf80Q0P641 193 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 DGAT2L6Q6ZPD8 337 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 NDUFAF7Q7L592 441 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 TRIM42Q8IWZ5 723 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 GALNT16Q8N428 558 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 ZNF321PQ8N8H1 164 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 EXD3Q8N9H8 876 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 FNDC5Q8NAU1 212 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 PLPP5Q8NEB5 264 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 BRIX1Q8TDN6 353 aaKnown RBP12.37□□□□□ -0.43
TUBD1-202ENST00000340993 KLHL29Q96CT2 875 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 MARK4Q96L34 752 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 FER1L6-AS2Q96M78 137 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 WDR77Q9BQA1 342 aaPredicted RBP12.37□□□□□ -0.43
TUBD1-202ENST00000340993 SEMA4CQ9C0C4 833 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 PTGFRNQ9P2B2 879 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 MCM8Q9UJA3 840 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 CLDN16Q9Y5I7 305 aa12.37□□□□□ -0.43
TUBD1-202ENST00000340993 NUP214P35658 2090 aaPredicted RBP12.37□□□□□ -0.43
TUBD1-202ENST00000340993 TCRBV16S1A1N1A0A5B0 115 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 HRKO00198 91 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 PRKNO60260 465 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-202ENST00000340993 OR10H2O60403 315 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 CTNSO60931 367 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 PRB1P04280 392 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 ITGAMP11215 1152 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 EFNA1P20827 205 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-202ENST00000340993 RRADP55042 308 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 NME5P56597 212 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 HSD17B7P56937 341 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 OCRLQ01968 901 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 ATP6AP1LQ52LC2 224 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 B3GNTL1Q67FW5 361 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-202ENST00000340993 NXNQ6DKJ4 435 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 PCSK4Q6UW60 755 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 LINC00696Q6ZRV3 163 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 MED25Q71SY5 747 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 TMEM102Q8N9M5 508 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-202ENST00000340993 ADAMTS18Q8TE60 1221 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
TUBD1-202ENST00000340993 ABHD17AQ96GS6 310 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 DGAT2Q96PD7 388 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 NUDT9Q9BW91 350 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 OR8D2Q9GZM6 311 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 WDR55Q9H6Y2 383 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-202ENST00000340993 LIN28AQ9H9Z2 209 aaKnown RBP12.36□□□□□ -0.43
TUBD1-202ENST00000340993 ATP13A2Q9NQ11 1180 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 ADAM29Q9UKF5 820 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 TP53TG5Q9Y2B4 290 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 MMACHCQ9Y4U1 282 aa12.36□□□□□ -0.43
TUBD1-202ENST00000340993 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 C17orf105B2RV13 164 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 HPP00738 406 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 PDGFAP04085 211 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 PIK3R1P27986 724 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 EPHA3P29320 983 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 HK2P52789 917 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 GUCY1A3Q02108 690 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 DUSP2Q05923 314 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 ZNF763Q0D2J5 394 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 PRSS53Q2L4Q9 553 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 OR52E8Q6IFG1 317 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 PTRH1Q86Y79 214 aaKnown RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 TMEM132CQ8N3T6 1108 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 LIX1Q8N485 282 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 ADCY4Q8NFM4 1077 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 DNAJB14Q8TBM8 379 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 IP6K3Q96PC2 410 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 BBC3Q96PG8 261 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 LPAR4Q99677 370 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 SLC25A23Q9BV35 468 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 CNPPD1Q9BV87 410 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 ZNF700Q9H0M5 742 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 AKTIPQ9H8T0 292 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 ZBTB20Q9HC78 741 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 RIC8BQ9NVN3 520 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 MS4A12Q9NXJ0 267 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 LUZP4Q9P127 313 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 UTS2RQ9UKP6 389 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 COL6A6A6NMZ7 2263 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 LOC102723996A0A087X1L8 192 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 TCP11X1B4DZS4 312 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 DYNC1I1O14576 645 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 PRR35P0CG20 571 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 SDC1P18827 310 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 RHDQ02161 417 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 KCNAB2Q13303 367 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 PTGR1Q14914 329 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 LTB4RQ15722 352 aa12.35□□□□□ -0.43
TUBD1-202ENST00000340993 CRTC2Q53ET0 693 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-202ENST00000340993 XKR7Q5GH72 579 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms