RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 BEST3Q8N1M1 668 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 ARMC10Q8N2F6 343 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 METTL4Q8N3J2 472 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 CCNYL1Q8N7R7 359 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 AGAP11Q8TF27 550 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 PTPMT1Q8WUK0 201 aaPredicted RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 SELENOMQ8WWX9 145 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 UCN3Q969E3 161 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 ZNF354BQ96LW1 612 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 ALOXE3Q9BYJ1 711 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 RPF2Q9H7B2 306 aaKnown RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 LYARQ9NX58 379 aaKnown RBP14.36□□□□□ -0.11
VAPA-201ENST00000340541 TEKT2Q9UIF3 430 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 PLLPQ9Y342 182 aa14.36□□□□□ -0.11
VAPA-201ENST00000340541 DYTNA2CJ06 578 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 SYNDIG1LA6NDD5 238 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 OR5H15A6NDH6 313 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 ESRRBO95718 433 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 EDN3P14138 238 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 CHN1P15882 459 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 CREB1P16220 341 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 DCTP40126 519 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 HTR6P50406 440 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 FOXA1P55317 472 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 PER3P56645 1201 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 STX4Q12846 297 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 FRMD7Q6ZUT3 714 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 OR4N5Q8IXE1 308 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 SRRM1Q8IYB3 904 aaKnown RBP14.35□□□□□ -0.11
VAPA-201ENST00000340541 LGI4Q8N135 537 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 SLC5A8Q8N695 610 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 METTL6Q8TCB7 284 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 FAR1Q8WVX9 515 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 KCNA7Q96RP8 456 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 TNFRSF12AQ9NP84 129 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 TEX10Q9NXF1 929 aaPredicted RBP14.35□□□□□ -0.11
VAPA-201ENST00000340541 ADAM29Q9UKF5 820 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 SLC12A4Q9UP95 1085 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 STK38LQ9Y2H1 464 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 CELSR2Q9HCU4 2923 aa14.35□□□□□ -0.11
VAPA-201ENST00000340541 MYO9AB2RTY4 2548 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TRAV17A0A0B4J275 112 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TRBV11-1A0A0K0K1C0 115 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 ENO4A6NNW6 628 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 AIFM1O95831 613 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 KRT6AP02538 564 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 KRT6BP04259 564 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 ENO1P06733 434 aaKnown RBP14.34□□□□□ -0.11
VAPA-201ENST00000340541 KLK1P06870 262 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TUBBP07437 444 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 UQCRHP07919 91 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 HSD3B1P14060 373 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 HSD3B2P26439 372 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 KRT6CP48668 564 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 ST13P50502 369 aaKnown RBP14.34□□□□□ -0.11
VAPA-201ENST00000340541 TAS2R50P59544 299 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 NAA20P61599 178 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 FOLH1Q04609 750 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TUBA3CQ13748 450 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 SERTAD2Q14140 314 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 MEP1AQ16819 746 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TUBA3EQ6PEY2 450 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 CYP20A1Q6UW02 462 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 DGAT2L6Q6ZPD8 337 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 COMMD6Q7Z4G1 85 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 RPS19BP1Q86WX3 136 aaKnown RBP14.34□□□□□ -0.11
VAPA-201ENST00000340541 C10orf107Q8IVU9 208 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TMEM132CQ8N3T6 1108 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 OR1N1Q8NGS0 311 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TANKQ92844 425 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 NCLNQ969V3 563 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 VMP1Q96GC9 406 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 ACPTQ9BZG2 426 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 CDCP1Q9H5V8 836 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 MID1IP1Q9NPA3 183 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 AHSPQ9NZD4 102 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 SLC17A7Q9P2U7 560 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 TIMM22Q9Y584 194 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 CACNA1DQ01668 2161 aa14.34□□□□□ -0.11
VAPA-201ENST00000340541 CRYBG3Q68DQ2 2970 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 GLOD5A6NK44 160 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 TMEM200CA6NKL6 621 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 PRKNO60260 465 aaPredicted RBP14.33□□□□□ -0.12
VAPA-201ENST00000340541 ULK1O75385 1050 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 SPAG7O75391 227 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 IFNA16P05015 189 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 NR2F6P10588 404 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 HMOX2P30519 316 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 TLX1P31314 330 aaPredicted RBP14.33□□□□□ -0.12
VAPA-201ENST00000340541 CD96P40200 585 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 BUD31P41223 144 aaPredicted RBP14.33□□□□□ -0.12
VAPA-201ENST00000340541 STT3AP46977 705 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 CLCN2P51788 898 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 MLF1P58340 268 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 CSTF3Q12996 717 aaKnown RBP14.33□□□□□ -0.12
VAPA-201ENST00000340541 ZNF468Q5VIY5 522 aaPredicted RBP14.33□□□□□ -0.12
VAPA-201ENST00000340541 LIPMQ5VYY2 423 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 ZNF321PQ8N8H1 164 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 CCDC63Q8NA47 563 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 MORN4Q8NDC4 146 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms