RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 MAZP56270 477 aaKnown RBP9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 C6orf132Q5T0Z8 1188 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 OR4N4Q8N0Y3 316 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 OXR1Q8N573 874 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 SMRP1Q8NCR6 262 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 SIMC1Q8NDZ2 872 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 OR52N2Q8NGI0 321 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 DOHHQ9BU89 302 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 GIN1Q9NXP7 522 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 APOBEC3BQ9UH17 382 aaKnown RBP9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 MTCH2Q9Y6C9 303 aa9.65□□□□□ -0.87
RBFOX1-202ENST00000340209 TTC28Q96AY4 2481 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 NPIPA5A0A0B4J1W7 369 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 A0A1W2PPW3 197 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 LRIT2A6NDA9 550 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 NPIPA7E9PJI5 369 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 VILLO15195 856 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 GMFGO60234 142 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 PRKNO60260 465 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 NDUFS2O75306 463 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 NPIPA8P0DM63 369 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 TNNI3P19429 210 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 DRD1P21728 446 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 CDH3P22223 829 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 PPIBP23284 216 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 DNAJA1P31689 397 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 RPL3P39023 403 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 MRPL19P49406 292 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 RAB39AQ14964 217 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 ZNF658BQ4V348 819 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 B3GNT6Q6ZMB0 384 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 TIMM29Q9BSF4 260 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 GLIPR2Q9H4G4 154 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SOHLH2Q9NX45 425 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 CORO2BQ9UQ03 480 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC17A4Q9Y2C5 497 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 AP3M1Q9Y2T2 418 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 GPR179Q6PRD1 2367 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 TOR1BO14657 336 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 APOL3O95236 402 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 GADD45GO95257 159 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 IFNW1P05000 195 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 CCR3P51677 355 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 HPCAP84074 193 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 RGS1Q08116 209 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 DBPQ10586 325 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 AMZ1Q400G9 498 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 CCNJQ5T5M9 372 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 KLHL17Q6TDP4 642 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 FAM92BQ6ZTR7 304 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 CBLL1Q75N03 491 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 C16orf62Q7Z3J2 963 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 ARMC8Q8IUR7 673 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SVOPLQ8N434 492 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 GIPC3Q8TF64 312 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC38A5Q8WUX1 472 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 RERGQ96A58 199 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SMAD5Q99717 465 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 TM9SF3Q9HD45 589 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 DUSP12Q9UNI6 340 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 PNMA8CA0A1B0GUJ8 204 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 A0A1W2PR48 441 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 C1orf226A1L170 272 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 NTN1O95631 604 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 HMGN2P05204 90 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 IGFBP1P08833 259 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 FPR1P21462 350 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 HIST1H1TP22492 207 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 PPP2R1BP30154 601 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 PIN1Q13526 163 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 FRMPD2BQ6IN97 320 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 UBE3DQ7Z6J8 389 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 OOSP2Q86WS3 158 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SYNPOQ8N3V7 929 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 AQP11Q8NBQ7 271 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 DNAJB8Q8NHS0 232 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 LMX1AQ8TE12 382 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 RSC1A1Q92681 617 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 COQ8BQ96D53 544 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 THAP11Q96EK4 314 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 PELI2Q9HAT8 420 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC35C2Q9NQQ7 365 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SELENONQ9NZV5 590 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 SPATA7Q9P0W8 599 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 ERVK-18Q9QC07 812 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 NDOR1Q9UHB4 597 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 MKLN1Q9UL63 735 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 DMTF1Q9Y222 760 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 ZNF780BQ9Y6R6 833 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 ALPK2Q86TB3 2170 aa9.64□□□□□ -0.87
RBFOX1-202ENST00000340209 A0A1B0GVG6 124 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 KRBA1A5PL33 1030 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 JUNDP17535 347 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 CDH2P19022 906 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 NT5EP21589 574 aa9.63□□□□□ -0.87
RBFOX1-202ENST00000340209 MATN1P21941 496 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms