RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 TLR4O00206 839 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CPNE3O75131 537 aaKnown RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 MTRF1O75570 445 aaKnown RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CSNK2BP67870 215 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 SLBPQ14493 270 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CDK10Q15131 360 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 SPHARQ15513 63 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 SYTL3Q4VX76 610 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 FBXO46Q6PJ61 603 aaPredicted RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 C19orf48Q6RUI8 117 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CEACAM20Q6UY09 585 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 USP45Q70EL2 814 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CHTF18Q8WVB6 975 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 IL17FQ96PD4 163 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CDCA4Q9BXL8 241 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 MVB12BQ9H7P6 319 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 SLAMF7Q9NQ25 335 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CLN6Q9NWW5 311 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 TVP23BQ9NYZ1 205 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 BTNL2Q9UIR0 455 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 GPR52Q9Y2T5 361 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 LSM2Q9Y333 95 aaKnown RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 A3GALT2U3KPV4 340 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 IGLV3-16A0A075B6K0 115 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 A0A1W2PQL4 384 aaPredicted RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 ERVH48-1M5A8F1 160 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 NCR1O76036 304 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 STATHP02808 62 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 IL3P08700 152 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CSF3P09919 207 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 LIMS1P48059 325 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 TBPL1P62380 186 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 PSPHP78330 225 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF91Q05481 1191 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 PIN1Q13526 163 aaPredicted RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 SUZ12Q15022 739 aaKnown RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 TEAD4Q15561 434 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 LYPLAL1Q5VWZ2 237 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 LIPJQ5W064 366 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CNKSR3Q6P9H4 555 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 B3GLCTQ6Y288 498 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF438Q7Z4V0 828 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 NLGN4YQ8NFZ3 816 aaPredicted RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 GPR32P1Q8NGA4 272 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CXorf36Q9H7Y0 433 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF282Q9UDV7 671 aaPredicted RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 CCL26Q9Y258 94 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 ANAPC1Q9H1A4 1944 aa11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 RANBP2P49792 3224 aaKnown RBP11.38□□□□□ -0.59
CCDC144CP-201ENST00000340196 COL4A6Q14031 1691 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 A0A0G2JN53 185 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 DVL2O14641 736 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 TLX2O43763 284 aaPredicted RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 SOCS5O75159 536 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 MSL3P1P0C860 447 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ETV6P41212 452 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 HNF4AP41235 474 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 OLR1P78380 273 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 GPLD1P80108 840 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 UBE3AQ05086 875 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 EEF1A2Q05639 463 aaKnown RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 CNTN1Q12860 1018 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 SLX4IPQ5VYV7 408 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF770Q6IQ21 691 aaPredicted RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 GRHL2Q6ISB3 625 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 C22orf39Q6P5X5 142 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 CBARPQ8N350 705 aaPredicted RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 HORMAD2Q8N7B1 307 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 RASGEF1AQ8N9B8 481 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 PIK3R3Q92569 461 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 PPCDCQ96CD2 204 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 CITED4Q96RK1 184 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 SLC6A16Q9GZN6 736 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 DYRK4Q9NR20 520 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 CLCA3PQ9Y6N3 262 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 A0A0G2JMP0 313 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 HEPACAM2A8MVW5 462 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 AKR7A2O43488 359 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 PRKYO43930 277 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 TSPAN9O75954 239 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 SCG5P05408 212 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 FURINP09958 794 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 APEX1P27695 318 aaKnown RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 SDC2P34741 201 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ETV5P41161 510 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 PXNP49023 591 aaPredicted RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ALDH9A1P49189 494 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ETV1P50549 477 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 METAP1P53582 386 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 LARS2Q15031 903 aaKnown RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ATAT1Q5SQI0 421 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 METTL2BQ6P1Q9 378 aaKnown RBP11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 DEFB128Q7Z7B8 93 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 OR52N2Q8NGI0 321 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF461Q8TAF7 563 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 ZNF480Q8WV37 535 aa11.37□□□□□ -0.59
CCDC144CP-201ENST00000340196 DIRAS2Q96HU8 199 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms