RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NCSTNQ92542 709 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TP53INP1Q96A56 240 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ALG14Q96F25 216 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 MACROD1Q9BQ69 325 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TIMM29Q9BSF4 260 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 STMN3Q9NZ72 180 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 RGPD3A6NKT7 1758 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 RGPD4Q7Z3J3 1758 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 HOXC11O43248 304 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 PSIP1O75475 530 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 MT-ND2P03891 347 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PFN3P60673 137 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM35AQ53FP2 167 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 DEFB119Q8N690 84 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 GAL3ST4Q96RP7 486 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PALMDQ9NP74 551 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 MKKSQ9NPJ1 570 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 SARDHQ9UL12 918 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 CPSF4LA6NMK7 179 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 SEMA4FO95754 770 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 LSAMPQ13449 338 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TRAM2Q15035 370 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ADGRD2Q7Z7M1 963 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ZSWIM9Q86XI8 627 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF419Q96HQ0 510 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 ZFYVE21Q9BQ24 234 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 C19orf43Q9BQ61 176 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 DCSTAMPQ9H295 470 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ANKMY1Q9P2S6 941 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM202A6NGA9 273 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PRR23D1E9PI22 279 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 VNN2O95498 520 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PRR23D2P0DMB1 279 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 GNSP15586 552 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 DDCP20711 480 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PSMB5P28074 263 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ACADLP28330 430 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PRDX1Q06830 199 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 FBXO43Q4G163 708 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PTRH1Q86Y79 214 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 FAR1Q8WVX9 515 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ASB16Q96NS5 453 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 IFT27Q9BW83 186 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 OBP2AQ9NY56 170 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 LIPT1Q9Y234 373 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ANKRD31Q8N7Z5 1873 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TBX1O43435 398 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 COQ9O75208 318 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 HNRNPA2B1P22626 353 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 RPS26P62854 115 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 GK3PQ14409 553 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 FIGLAQ6QHK4 219 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 METTL4Q8N3J2 472 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 OR51V1Q9H2C8 321 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 FBRSQ9HAH7 460 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 SLC35C2Q9NQQ7 365 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 DAPL1A0PJW8 107 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 GPR89AB7ZAQ6 455 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PRRT4C9JH25 899 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 H3BQ06 376 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 HAT1O14929 419 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 AREL1O15033 823 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 SEMA3DO95025 777 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 GPR89BP0CG08 455 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 MOGQ16653 247 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 LUZP2Q86TE4 346 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 NECTIN4Q96NY8 510 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 SPIN1Q9Y657 262 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 GFYI3L273 518 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 DNAJB5O75953 348 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 CH25HO95992 272 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 STSP08842 583 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ELOCQ15369 112 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 SMARCD3Q6STE5 483 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM107Q6UX40 140 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 OR4K5Q8NGD3 323 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 OR56A3Q8NH54 315 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 IFT52Q9Y366 437 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 VSTM5A8MXK1 200 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 LOC110117498-PIK3R3F6TDL0 507 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 CD160O95971 181 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 ADAP00813 363 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PORP16435 677 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 AK4P27144 223 aaPredicted RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 TMBIM6P55061 237 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 HBA1P69905 142 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 HYAL2Q12891 473 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 GINS1Q14691 196 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 MZT2BQ6NZ67 158 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 GKN2Q86XP6 184 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 PLA2G15Q8NCC3 412 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 OR2L5Q8NG80 312 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 SNTG1Q9NSN8 517 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 REM1O75628 298 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 HMGN1P05114 100 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 TSTQ16762 297 aaKnown RBP6□□□□□ -1.45
PRKDC-202ENST00000338368 NR4A3Q92570 626 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 C5orf34Q96MH7 638 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 EPHX3Q9H6B9 360 aa6□□□□□ -1.45
PRKDC-202ENST00000338368 KCNK12Q9HB15 430 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms