RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CDSNQ15517 529 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 FAM83EQ2M2I3 478 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 GXYLT1Q4G148 440 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 DEPDC1Q5TB30 811 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 PRAMEF9Q5VWM5 478 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 KHDRBS2Q5VWX1 349 aaKnown RBP9.88□□□□□ -0.83
CAPN3-202ENST00000337571 KLC3Q6P597 504 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 CCDC91Q7Z6B0 441 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 UBE3DQ7Z6J8 389 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 GPR180Q86V85 440 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF295-AS1Q8N0V1 137 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 TEX9Q8N6V9 391 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 OR5M3Q8NGP4 307 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 OR10Q1Q8NGQ4 319 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 FBF1Q8TES7 1133 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 TANKQ92844 425 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 REPS1Q96D71 796 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 C14orf79Q96F83 325 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 ART5Q96L15 291 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 OR51B5Q9H339 312 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 EXO5Q9H790 373 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 RPF2Q9H7B2 306 aaKnown RBP9.88□□□□□ -0.83
CAPN3-202ENST00000337571 ACTR8Q9H981 624 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 IL1RL2Q9HB29 575 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 PHF11Q9UIL8 331 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 PCDHGA11Q9Y5H2 935 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 CSMD2Q7Z408 3487 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 PCNX1Q96RV3 2341 aa9.88□□□□□ -0.83
CAPN3-202ENST00000337571 ABCA12Q86UK0 2595 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 A0A087X1B8 175 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 IQANK1A0A1B0GTG1 560 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 OR14I1A6ND48 311 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 G3V3Y1 287 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 BCKDKO14874 412 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 FAM155BO75949 473 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 GFAPP14136 432 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 EPORP19235 508 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 BUD31P41223 144 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 PIK3CBP42338 1070 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 STT3AP46977 705 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 TLE4Q04727 773 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 TBL3Q12788 808 aaKnown RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 ASPHQ12797 758 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 UAP1Q16222 522 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 MPEG1Q2M385 716 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 LIPJQ5W064 366 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 SLC22A10Q63ZE4 541 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 GRHL2Q6ISB3 625 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF585AQ6P3V2 769 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 CYP20A1Q6UW02 462 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF793Q6ZN11 406 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 SLC29A4Q7RTT9 530 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 CMC1Q7Z7K0 106 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 OR4N5Q8IXE1 308 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 FAM109AQ8N4B1 249 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF321PQ8N8H1 164 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 LILRB4Q8NHJ6 448 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 HUS1BQ8NHY5 278 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 SLC22A8Q8TCC7 542 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 ANKRD9Q96BM1 317 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 PPWD1Q96BP3 646 aaKnown RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 NXNL1Q96CM4 212 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 MRRFQ96E11 262 aaKnown RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 SENP5Q96HI0 755 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 SCYL1Q96KG9 808 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 PELOQ9BRX2 385 aaKnown RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 TTTY12Q9BZ98 90 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 ENKD1Q9H0I2 346 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 WDR41Q9HAD4 459 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 DEPPQ9NTK1 212 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 GRHL1Q9NZI5 618 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 ACAD8Q9UKU7 415 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 PYCARDQ9ULZ3 195 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 RNF6Q9Y252 685 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 TNPO3Q9Y5L0 923 aaKnown RBP9.87□□□□□ -0.83
CAPN3-202ENST00000337571 CSMD1Q96PZ7 3565 aa9.87□□□□□ -0.83
CAPN3-202ENST00000337571 EML6Q6ZMW3 1958 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ATP6AP2A0A1C7CYW4 349 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 CCDC189A1A4V9 331 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 PINLYPA6NC86 204 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 FIGNL2A6NMB9 653 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 FAM90A27PA6NNH2 459 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 OR10H2O60403 315 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ATP6AP2O75787 350 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 SCELO95171 688 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ETHE1O95571 254 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ACVR2AP27037 513 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 PHBP35232 272 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ARL1P40616 181 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-202ENST00000337571 PIK3CGP48736 1102 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 MAN2A2P49641 1150 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ARFIP1P53367 373 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ALDH18A1P54886 795 aaKnown RBP9.86□□□□□ -0.83
CAPN3-202ENST00000337571 KCNJ2P63252 427 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 PLIN5Q00G26 463 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 E2F2Q14209 437 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 ACAP2Q15057 778 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 PFKFB4Q16877 469 aa9.86□□□□□ -0.83
CAPN3-202ENST00000337571 PIGGQ5H8A4 983 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms