RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 DSCR3O14972 297 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 NME6O75414 186 aaPredicted RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CCNB2O95067 398 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CDRT1O95170 752 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 PSMA1P25786 263 aaKnown RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 EPHB3P54753 998 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 SLBPQ14493 270 aaKnown RBP eCLIP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 FAM209AQ5JX71 171 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 PXDC1Q5TGL8 231 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 SERPINA11Q86U17 422 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 UXS1Q8NBZ7 420 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 XAGE5Q8WWM1 108 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 EXOSC8Q96B26 276 aaKnown RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ARMC5Q96C12 935 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ECHDC3Q96DC8 303 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 FRMD6Q96NE9 622 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 COL21A1Q96P44 957 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 PSORS1C1Q9UIG5 152 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 KCNE2Q9Y6J6 123 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 PRAMEF33A0A0G2JMD5 474 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ARHGEF33A8MVX0 844 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 TLX2O43763 284 aaPredicted RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 PRAMEF10O60809 474 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ENTPD6O75354 484 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CATP04040 527 aaKnown RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CDK1P06493 297 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 GGT2P36268 569 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CTSCP53634 463 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 RAE1P78406 368 aaKnown RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 KCNJ10P78508 379 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 PTSQ03393 145 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 FADDQ13158 208 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 SLC8B1Q6J4K2 584 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 MZT2BQ6NZ67 158 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 TUBA3EQ6PEY2 450 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 TMEM220Q6QAJ8 160 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 PAMR1Q6UXH9 720 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 TPRG1Q6ZUI0 275 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 LAX1Q8IWV1 398 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 LRRC17Q8N6Y2 441 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 OR4C15Q8NGM1 316 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 WDR48Q8TAF3 677 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 GABARAPL3Q9BY60 117 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 SLC22A4Q9H015 551 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 IGFLR1Q9H665 355 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ATP6V1HQ9UI12 483 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 SSR3Q9UNL2 185 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ARID1BQ8NFD5 2236 aaPredicted RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 TRAV19A0A0A6YYK7 116 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 MEIOCA2RUB1 952 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 SLITRK5O94991 958 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CH25HO95992 272 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 TNFSF8P32971 234 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 GPC1P35052 558 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 OLR1P78380 273 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CNTN1Q12860 1018 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ELAVL2Q12926 359 aaKnown RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 TARDBPQ13148 414 aaKnown RBP eCLIP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 SLC5A12Q1EHB4 618 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 GPR33Q49SQ1 333 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ZNF385BQ569K4 471 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 CLEC12AQ5QGZ9 265 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 LRRC70Q7Z2Q7 622 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 GHDCQ8N2G8 530 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 L3MBTL4Q8NA19 623 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 OR7G3Q8NG95 312 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 NEIL2Q969S2 332 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 NARS2Q96I59 477 aaKnown RBP9.65□□□□□ -0.86
HIF1A-202ENST00000337138 IL20RAQ9UHF4 553 aa9.65□□□□□ -0.86
HIF1A-202ENST00000337138 ZDBF2Q9HCK1 2354 aa9.65□□□□□ -0.87
HIF1A-202ENST00000337138 PRR23AA6NEV1 266 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 GLOD5A6NK44 160 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 NPC1O15118 1278 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 HOXC11O43248 304 aaPredicted RBP9.64□□□□□ -0.87
HIF1A-202ENST00000337138 GASTP01350 101 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 CLEC2LP0C7M8 214 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 JUPP14923 745 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 GPX2P18283 190 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 RNF144AP50876 292 aaPredicted RBP9.64□□□□□ -0.87
HIF1A-202ENST00000337138 MLLT1Q03111 559 aaPredicted RBP9.64□□□□□ -0.87
HIF1A-202ENST00000337138 EEF1A2Q05639 463 aaKnown RBP9.64□□□□□ -0.87
HIF1A-202ENST00000337138 CDC20Q12834 499 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 C22orf42Q6IC83 251 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 TMIGD1Q6UXZ0 262 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 USP30Q70CQ3 517 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 SLC46A3Q7Z3Q1 461 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 NOXA1Q86UR1 476 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 RBM45Q8IUH3 476 aaKnown RBP9.64□□□□□ -0.87
HIF1A-202ENST00000337138 NATD1Q8N6N6 113 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 DCAF4L2Q8NA75 395 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 DEDD2Q8WXF8 326 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 ASB11Q8WXH4 323 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 SLC12A9Q9BXP2 914 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 RNF186Q9NXI6 227 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 CCDC88CQ9P219 2028 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 GSAPA4D1B5 854 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 ARHGAP33O14559 1287 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 KMOO15229 486 aa9.64□□□□□ -0.87
HIF1A-202ENST00000337138 IFNW1P05000 195 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms