RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TDHQ8IZJ6 230 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 DGCR14Q96DF8 476 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 MSLNLQ96KJ4 702 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 RBM4BQ9BQ04 359 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 RBM4Q9BWF3 364 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 RBM38Q9H0Z9 239 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 SRMSQ9H3Y6 488 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 SERHL2Q9H4I8 314 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 C1GALT1Q9NS00 363 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 PAK1IP1Q9NWT1 392 aaPredicted RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 KCNE3Q9Y6H6 103 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 WDFY3Q8IZQ1 3526 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 LOC105369274A0A096LPK9 316 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 LOC102723532A0A0G2JNH3 316 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 SERTM1A2A2V5 107 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 HCRTR1O43613 425 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 TNFRSF21O75509 655 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 CDH2P19022 906 aaPredicted RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 CLK3P49761 638 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 HOXC5Q00444 222 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 MAP7Q14244 749 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 LASP1Q14847 261 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 LEXMQ3ZCV2 418 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 GPR155Q7Z3F1 870 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 THAP5Q7Z6K1 395 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 NUDT13Q86X67 352 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 TRIM48Q8IWZ4 208 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 OR4N4Q8N0Y3 316 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 CREB3L4Q8TEY5 395 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 FAM3CQ92520 227 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 UBE2E3Q969T4 207 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 RGMAQ96B86 450 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 TOE1Q96GM8 510 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 NPLQ9BXD5 320 aaPredicted RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 EHD1Q9H4M9 534 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 ADPRHL2Q9NX46 363 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 NDUFAF4Q9P032 175 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 RPS6KA6Q9UK32 745 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 MRPS2Q9Y399 296 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 SIM1P81133 766 aaPredicted RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 GPR18Q14330 331 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 RAB39AQ14964 217 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 EXOC3L2Q2M3D2 409 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 KIAA1161Q6NSJ0 714 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 DEF8Q6ZN54 512 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 COMTD1Q86VU5 262 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 ANKRD13BQ86YJ7 626 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 SLC22A18ASQ8N1D0 253 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 SLC5A8Q8N695 610 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 ACOT4Q8N9L9 421 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 ABHD11Q8NFV4 315 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 TMEM19Q96HH6 336 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 C7orf34Q96L11 122 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 FEVQ99581 238 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 NIPSNAP1Q9BPW8 284 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 MAPKAP1Q9BPZ7 522 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 GLIPR2Q9H4G4 154 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 KRT84Q9NSB2 600 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 ZCCHC3Q9NUD5 404 aaKnown RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 GMEB1Q9Y692 573 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 CABIN1Q9Y6J0 2220 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 TRBC2A0A5B9 178 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 C5orf58C9J3I9 102 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 CHRM5P08912 532 aaPredicted RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 IDH2P48735 452 aaKnown RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 DSTNP60981 165 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 DGCR6Q14129 220 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 BPHLQ86WA6 291 aaPredicted RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 RAB42Q8N4Z0 105 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 CHDHQ8NE62 594 aaPredicted RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 OR52N2Q8NGI0 321 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 UTP15Q8TED0 518 aaKnown RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 SLC38A5Q8WUX1 472 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 WARS2Q9UGM6 360 aaKnown RBP11.93□□□□□ -0.5
LIMK1-201ENST00000336180 ORC6Q9Y5N6 252 aa11.93□□□□□ -0.5
LIMK1-201ENST00000336180 A0A087WXM4 84 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 PRAMEF27A3QJZ7 478 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SHISA7A6NL88 538 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 TNFRSF11BO00300 401 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 P2RX6O15547 441 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SLC28A2O43868 658 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 CTSVO60911 334 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 B3GALNT1O75752 331 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SOX14O95416 240 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 ZNF888P0CJ79 500 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 MASP1P48740 699 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 CCT3P49368 545 aaKnown RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 SRP54P61011 504 aaKnown RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 HYAL2Q12891 473 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 PDE7AQ13946 482 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 E2F2Q14209 437 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 FGD3Q5JSP0 725 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 FRMPD2BQ6IN97 320 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 USP51Q70EK9 711 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 LACC1Q8IV20 430 aa11.92□□□□□ -0.5
LIMK1-201ENST00000336180 TTC29Q8NA56 475 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-201ENST00000336180 VMP1Q96GC9 406 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms