RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR1E2P47887 323 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 CTAG1AP78358 180 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 FADDQ13158 208 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 POU4F3Q15319 338 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 COX20Q5RI15 118 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 CPTPQ5TA50 214 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 CCDC190Q86UF4 302 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 HIPK1Q86Z02 1210 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 NAGSQ8N159 534 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SPPL3Q8TCT6 385 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 KLHL42Q9P2K6 505 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SCML1Q9UN30 329 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 AP3M1Q9Y2T2 418 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SLC5A10A0PJK1 596 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 KPNA5O15131 536 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 WBP4O75554 376 aaKnown RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 FGBP02675 491 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 ADH5P11766 374 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 KDELR2P33947 212 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 CRATP43155 626 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 UGT2B15P54855 530 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 ST8SIA6P61647 398 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SLBPQ14493 270 aaKnown RBP eCLIP13.24□□□□□ -0.29
SF1-202ENST00000334944 MAD2L1BPQ15013 274 aaPredicted RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 FLYWCH1Q4VC44 716 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 CDKL4Q5MAI5 379 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 LIPJQ5W064 366 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 GPR153Q6NV75 609 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 FAM122CQ6P4D5 195 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 OR52J3Q8NH60 311 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 WDR48Q8TAF3 677 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 ST8SIA2Q92186 375 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 RDH12Q96NR8 316 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 C19orf43Q9BQ61 176 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 C1QTNF6Q9BXI9 259 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SPATA6Q9NWH7 488 aaPredicted RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 MAFFQ9ULX9 164 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SNX7Q9UNH6 387 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 LTBP2Q14767 1821 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SCAMP1O15126 338 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SLC16A6O15403 523 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 LZTS3O60299 673 aaPredicted RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 SOD1P00441 154 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 RPLP0P05388 317 aaKnown RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 STSP08842 583 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 WASP42768 502 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 GPR1P46091 355 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 PRLHRP49683 370 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 DPPA4Q7L190 304 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 CHCHD4Q8N4Q1 142 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 NLGN4YQ8NFZ3 816 aaPredicted RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 ARRDC3Q96B67 414 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.24□□□□□ -0.292e-9■■□□□ 11.8
SF1-202ENST00000334944 C11orf54Q9H0W9 315 aaPredicted RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 MCCC2Q9HCC0 563 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 TM7SF3Q9NS93 570 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 SIRT5Q9NXA8 310 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 EXO1Q9UQ84 846 aaKnown RBP13.24□□□□□ -0.29
SF1-202ENST00000334944 GRIP1Q9Y3R0 1128 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 CLCA3PQ9Y6N3 262 aa13.24□□□□□ -0.29
SF1-202ENST00000334944 PNMA8CA0A1B0GUJ8 204 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 SLC16A5O15375 505 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 CCNDBP1O95273 360 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 PTHP01270 115 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 JUNDP17535 347 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 PIK3CBP42338 1070 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 DGKEP52429 567 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 CRYBA2P53672 197 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 UBE3AQ05086 875 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 MXD1Q05195 221 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 MTAPQ13126 283 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 TCEA2Q15560 299 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 ARMCX4Q5H9R4 360 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 ATG16L2Q8NAA4 619 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 OR4A15Q8NGL6 344 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 ZNF566Q969W8 418 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 TMCO6Q96DC7 493 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 TOE1Q96GM8 510 aaKnown RBP13.23□□□□□ -0.29
SF1-202ENST00000334944 FOPNLQ96NB1 174 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 GPR83Q9NYM4 423 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 RUVBL1Q9Y265 456 aaKnown RBP13.23□□□□□ -0.29
SF1-202ENST00000334944 KCNE2Q9Y6J6 123 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 F5P12259 2224 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 CCDC88CQ9P219 2028 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 TRIOO75962 3097 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 SCAMP2O15127 329 aaKnown RBP13.23□□□□□ -0.29
SF1-202ENST00000334944 PDPK1O15530 556 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 C1orf105O95561 183 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 CHRM5P08912 532 aaPredicted RBP13.23□□□□□ -0.29
SF1-202ENST00000334944 ETFAP13804 333 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 NPPBP16860 134 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 C1orf53Q5VUE5 145 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 LAMTOR1Q6IAA8 161 aa13.23□□□□□ -0.29
SF1-202ENST00000334944 TMEM65Q6PI78 240 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms