RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 EVX2Q03828 476 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 KCNJ8Q15842 424 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 BCL2A1Q16548 175 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ENPP6Q6UWR7 440 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 FAM71E2Q8N5Q1 922 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 OR56B2PQ8NGI1 322 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 OR13C3Q8NGS6 347 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 WDR20Q8TBZ3 569 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TRMT10AQ8TBZ6 339 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CD99L2Q8TCZ2 262 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ZFP90Q8TF47 636 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 DOHHQ9BU89 302 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TMEM121BQ9BXQ6 578 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 EPHA6Q9UF33 1036 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 HEBP2Q9Y5Z4 205 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 SOBPA7XYQ1 873 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 J3KR12 359 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CAPNS1P04632 268 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 RHOP08100 348 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CDK4P11802 303 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 NR0B1P51843 470 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF136P52737 540 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.95e-7■■■■■ 32.2
COL4A6-201ENST00000334504 GRB7Q14451 532 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 METTL4Q8N3J2 472 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 KRTCAP2Q8N6L1 136 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 FAM83FQ8NEG4 500 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TSPEARQ8WU66 669 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 SH3YL1Q96HL8 342 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 POLDIP3Q9BY77 421 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 MKS1Q9NXB0 559 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TMEM181Q9P2C4 612 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 FAM198AQ9UFP1 575 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 PCTPQ9UKL6 214 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 MDFIC2A0A1B0GVS7 189 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ANKRD33BA6NCL7 494 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RNF13O43567 381 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 BCAS1O75363 584 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SLC22A5O76082 557 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SCGB1D1O95968 90 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 EBLN1P0CF75 366 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RFC2P35250 354 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 AGTR2P50052 363 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 TXNDC5Q8NBS9 432 aaKnown RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 OR2T33Q8NG76 320 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 KCNH6Q9H252 994 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 NME7Q9Y5B8 376 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 LRRTM2O43300 516 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CLCNKBP51801 687 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 FUT2Q10981 343 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SCGB2A2Q13296 93 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 METTL11BQ5VVY1 283 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF611Q8N823 705 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SOCS4Q8WXH5 440 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 QRSL1Q9H0R6 528 aaKnown RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PCDHA2Q9Y5H9 948 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SDHDO14521 159 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 VNN1O95497 513 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 APODP05090 189 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RPS17P08708 135 aaKnown RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PRKAR1BP31321 381 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 LEPRP48357 1165 aaKnown RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RNF144AP50876 292 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ACTC1P68032 377 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ACTA1P68133 377 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PRKCZQ05513 592 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RIN1Q13671 783 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SGCBQ16585 318 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 MPP7Q5T2T1 576 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PRSS48Q7RTY5 328 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SETD7Q8WTS6 366 aaKnown RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 RAB11FIP5Q9BXF6 653 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 TAC3Q9UHF0 121 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 DNMT3AQ9Y6K1 912 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 A0A096LPI6 279 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 A8MU76 341 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 COQ9O75208 318 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PEX14O75381 377 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF8P17098 575 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CDK2P24941 298 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 SSTR4P31391 388 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 GPR149Q86SP6 731 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 AMZ2Q86W34 360 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF283Q8N7M2 679 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CHPT1Q8WUD6 406 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 WDR77Q9BQA1 342 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-201ENST00000334504 OR51B5Q9H339 312 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 OR51J1Q9H342 316 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 KCNJ16Q9NPI9 418 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CLEC4EQ9ULY5 219 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 MEIOCA2RUB1 952 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 YJEFN3A6XGL0 299 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 TMEM150CB9EJG8 249 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 MTX2O75431 263 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 ALPPL2P10696 532 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 UQCRC2P22695 453 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 PYCR1P32322 319 aa9.42□□□□□ -0.9
COL4A6-201ENST00000334504 CTSOP43234 321 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms